SGN Marker C2_At1g78930

SGN-M7103
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle311233 (SGN)
129382 (CGN)
---
Lycopersicon CombinedSingleSGN-U228580---
Solanum tuberosumSingleSGN-U265178---
ArabidopsisSingleAt1g78930 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 25517)
Chromosome
1
Position
29.68 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41179
Forward primer (5'-3')
AGGCCTGGATGATGATATTATTGGTAGG
Accessions and product sizes
Solanum lycopersicum TA209
300
Solanum pennellii TA56
300
Approximate temperature
55°C
Reverse primer (5'-3')
AGGCTTGAGAACTTCGTCTATGCTGTA
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
225
Solanum pennellii TA56
300
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g78930  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7103 marker 7103
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