SGN Marker C2_At3g11964

SGN-M7708
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle307649 (SGN)
128888 (CGN)		---
Capsicum annuumSingleSGN-U197654---
Lycopersicon CombinedSingleSGN-U240932---
Solanum tuberosumSingleSGN-U256677---
ArabidopsisSingleAt3g11964 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26135)
Chromosome
3
Position
3.80 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41368
Forward primer (5'-3')
TTGATGATGAATCTGTTGATGGGAAG
Accessions and product sizes
Solanum pennellii TA56
1400
Solanum lycopersicum TA209
1400
Approximate temperature
55°C
Reverse primer (5'-3')
TTCTGCAATCGATCGTGCCTTCTC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
1400
Solanum pennellii TA56
1100
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At3g11964  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7708 marker 7708
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