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SGN Marker C2_At3g18680

SGN-M7790
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U204415---
Lycopersicon CombinedSingleSGN-U217947---
Solanum tuberosumSingleSGN-U254486---
ArabidopsisSingleAt3g18680 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38484)
Chromosome
3
Position
72.50 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41409
Forward primer (5'-3')
AATGCTCTCAGTTCACCGTCTCTCTG
Accessions and product sizes
Solanum pennellii TA56
275
Solanum lycopersicum TA209
275
Approximate temperature
55°C
Reverse primer (5'-3')
ATGTTCCATTATTTGTCATTGTGACAC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
175
Solanum pennellii TA56
225
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 26220)
Chromosome
3
Position
6.43 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At3g18680  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7790 marker 7790
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