SGN Marker C2_At3g19370

SGN-M7798
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle301854 (SGN)
124113 (CGN)
---
Lycopersicon CombinedSingleSGN-U227558---
ArabidopsisSingleAt3g19370 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38488)
Chromosome
1
Position
149.00 cM
Confidence
I(LOD2)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39722
Forward primer (5'-3')
AACAAGTGCGAAAACTTGACAAGTG
Accessions and product sizes
Solanum pennellii TA56
575
Solanum lycopersicum TA209
600
Approximate temperature
55°C
Reverse primer (5'-3')
TGCCGAGGCAGCAGTTATCTCC
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 26228)
Chromosome
3
Position
6.71 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Other COSII sequence data 
Forward amplicon sequence for S. hirtum 120062 plant #28, AB1 chromatogram - [View]
Forward amplicon sequence for S. hirtum 120062 plant #28, plain text
Forward amplicon sequence for S. quitoense plant #3, AB1 chromatogram - [View]
Forward amplicon sequence for S. quitoense plant #3, plain text

Genomic location of C2_At3g19370  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7798 marker 7798
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)