SGN Marker C2_At3g21215

SGN-M7830
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U197920---
Lycopersicon CombinedSingleSGN-U218734---
Solanum tuberosumSingleSGN-U248334---
ArabidopsisSingleAt3g21215 on TAIR---
Mapped locations  
Map: Tobacco N. tomentosiformis   
Map version
91 (location: 46677)
Chromosome
3
Position
111.60 cM
Confidence
F(LOD3)
Protocol
CAPS


Tobacco N. tomentosiformis

Map: Tomato-EXPEN 2000   
Map version
52 (location: 38499)
Chromosome
3
Position
167.50 cM
Confidence
CF(LOD3)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41425
Forward primer (5'-3')
TGCACATGACCAGAGTAAACGTATGCG
Accessions and product sizes
Solanum pennellii TA56
800
Solanum lycopersicum TA209
800
Approximate temperature
55°C
Reverse primer (5'-3')
AGCTCTTCCTCATTTATATTCTCTCC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
500
Solanum pennellii TA56
250
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 26261)
Chromosome
3
Position
7.44 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At3g21215  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7830 marker 7830
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