SGN Marker C2_At3g47850

SGN-M7941
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U199711---
Lycopersicon CombinedMultipleSGN-U215009---
Solanum tuberosumSingleSGN-U264542---
ArabidopsisSingleAt3g47850 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26375)
Chromosome
3
Position
17.67 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41466
Forward primer (5'-3')
ACCGCTTCAAACCCTAACCCTAAC
Accessions and product sizes
Solanum pennellii TA56
850
Solanum lycopersicum TA209
850
Approximate temperature
55°C
Reverse primer (5'-3')
TGATTATCAGTTGCATCCTCTTTGTTGC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
850
Solanum pennellii TA56
500
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At3g47850  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7941 marker 7941
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