SGN Marker C2_At3g54130

SGN-M8020
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle310120 (SGN)
130427 (CGN)		---
Lycopersicon CombinedSingleSGN-U238182---
Solanum tuberosumSingleSGN-U248575---
ArabidopsisSingleAt3g54130 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26455)
Chromosome
3
Position
20.05 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41494
Forward primer (5'-3')
AGGAGTTAGCAATGGAGGGATGTTG
Accessions and product sizes
Solanum lycopersicum TA209
1200
Solanum pennellii TA56
1200
Approximate temperature
55°C
Reverse primer (5'-3')
TTCCGCTCACCAGGAAAATGCTC
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
800
Solanum lycopersicum TA209
1200
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At3g54130  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8020 marker 8020
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