SGN Marker C2_At5g01590

SGN-M8543
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U203930---
Lycopersicon CombinedSingleSGN-U219556---
Solanum tuberosumSingleSGN-U247083---
ArabidopsisSingleAt5g01590 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26991)
Chromosome
5
Position
0.23 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41655
Forward primer (5'-3')
ATCTAAAACCTCAAACCACATAAACCC
Accessions and product sizes
Solanum lycopersicum TA209
750
Solanum pennellii TA56
750
Approximate temperature
60°C
Reverse primer (5'-3')
AAGCTCAAGCTCATTGATTTTATCAGC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
750
Solanum pennellii TA56
650
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At5g01590  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8543 marker 8543
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