SGN Marker TG574
SGN-M9
Synonyms |
Locus associations |
RFLP details |
Insert size
950
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image |
Forward sequence
TATATCAATTGATTGGTACCTTTGAGAAATGATTTAACTATTTTCTTGGGAAGAGATGCTCTCGGGAAATCTGTTGCAAATTTCCTTGTA
GAGAAAACGAATGGTGATCCTCTTGCAAAAGCAGTGAGCCAATGTGTAATGTATTCAATGCTGGTCTCCATGGATGTCATTGTATATGGT TCCGTACAGAGATTGTTTTTTTCCAGCAAGGAAAATCTAGAAGACAAAACGTTGTTGTATCAGTAATCTTTTCTATTCTTCATATTCATG GAGCCTTCAATTAGCAAGTGGAGTCAATGCTAGTAAGGGTAGATGTTCCAAACTCAAAAGGCTTTTGGATCAAATTGCAGCTGAATGAGA TGTTTTTGCAGAATCAACACGTGCATGCTGGGTCAAGTAGTATCTTTTCATACCTTGTTATTTTTTTTTTTGTTTCATTGTTAGTTTAAA GTTGGAAGTTCTTTTTTATTTTTAGTTGGTGGATAGCCT |
Reverse sequence
CAGCAGGCTCCTCAAGACTGTTATCCAAAATGAATTATTATAAAGTTGCATCAGGCAAATTAAAAACAAAAAAAAGAGGTGTGCTGTACT
ATCCATCCATGTATAGAACAGGCTCCTCGAGATACAAAGAGAAATAAGGGCCATTCATCATCAGCTGGAAAGGTAATGGAGGATAAGACT CATAAAGAGAGAGGAGGGGTCCTGCATTTTTGTACTTGTACAAGGCTTTCCACACAACATTTATGGGTCTTCACTATCAAGCTGATCATT CCACATAAAGTGGTCCATGCATATTTGGCATTTATTACCCATCTCACATTTCTTCTAAAAATAACAATAATAAATTCAACAGTCAGGTGC TAAGAAACAACACATCCTGGAAAGAACCAATATTTTTCTAGAAAGCGAGATGGAGGAGATTCTTCTGACTGACCATTAGGCTATCCACCA ACTAAAAATAAAAAAGAACTTCCAACTCTAAACTAACAATGAAACAAAAAAAAAAATAACAAGGTATGAAAAGATACTACTTGACCCAGC ATGCACGTGTTGATTCTGCAAAAACATCTCATTCAGCTGCAATTTGATCCAAAAGCCTTTTGAGTTTGGAACATCTACCCTTACTAGCAT TGACTC |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U147309 | 416 (85.1% of RFLP seq) | + | |
SGN-U147309 | 2.5e-68 | 130 (20.4% of RFLP seq) | - |
SGN-U147309 | 1.3e-88 | 204 (32.1% of RFLP seq) | - |
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| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXHIR 1997 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Tomato-EXPIMP 2001 |
Overgo hybridization and physical mapping |
TG574 was used as an overgo probe on plate 6 [well F12]
Plausible BAC Matches: None
Overgo Sequences
A sequence
CGAATGGTGATCCTCTTGCAAAAG
|
B sequence
ACACATTGGCTCACTGCTTTTGCA
|
AB sequence
CGAATGGTGATCCTCTTGCAAAAGCAGTGA
|
Marker sequence
TATATCAATTGATTGGTACCTTTGAGAAATGATTTAACTATTTTCTTGGG
AAGAGATGCTCTCGGGAAATCTGTTGCAAATTTCCTTGTAGAGAAAACGA ATGGTGATCCTCTTGCAAAAGCAGTGAGCCAATGTGTAATGTATTCAATG CTGGTCTCCATGGATGTCATTGTATATGGTTCCGTACAGAGATTGTTTTT TTCCAGCAAGGAAAATCTAGAAGACAAAACGTTGTTGTATCAGTAATCTT TTCTATTCTTCATATTCATGGAGCCTTCAATTAGCAAGTGGAGTCAATGC TAGTAAGGGTAGATGTTCCAAACTCAAAAGGCTTTTGGATCAAATTGCAG CTGAATGAGATGTTTTTGCAGAATCAACACGTGCATGCTGGGTCAAGTAG TATCTTTTCATACCTTGTTATTTTTTTTTTTGTTTCATTGTTAGTTTAAA GTTGGAAGTTCTTTTTTATTTTTAGTTGGTGGATAGCCT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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