SGN Marker SSR248
SGN-M921
| Synonyms |
| Locus associations |
| SSR info |
Annealing temperatures: Low: 47.619 High: 50
Repeat motif: TA Repeat number: 21
Repeat motif: Repeat number:
Forward primer: GCATTCGCTGTAGCTCGTTT
Reverse primer: GGGAGCTTCATCATAGTAACG
Predicted size: 249
| Derivations |
This marker was derived from EST read SGN-E142359
 Mapped locations
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Mapped locations
|  Tomato - Kazusa and SolCAP markers mapped to genome |
|  Kazusa F2-2000 genetic map |
|  Tomato-EXPEN 2000 |
| Other PCR data |
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| Overgo hybridization and physical mapping |
SSR248 was used as an overgo probe on plate 1 [well H3]
Plausible BAC Matches: P053C17, P008L22, P094L13, P045P14, P282B09, P212C02, P022F15, P141I23, P229E06, P294M03, P315E21, P322I21, P074M01, P033C24, P255P03, P247J01, P094C13, P310K19, P206B22, P101M13, P150P13
Overgo Sequences
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A sequence
GAACATTCGGAGATCCACCATCAC
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B sequence
TCCTCTGCTGCTCTTTGTGATGGT
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AB sequence
GAACATTCGGAGATCCACCATCACAAAGAG
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Marker sequence
GAAAGGGATGCACCTCCACATATCATCAACACATGCAACGGAAGACATTG
TGGAGATACATTCACAGGTCCCAACGGTCCTAACAAACCTTCTCTATGGA CTGAAAATTGGACCGCTCAGTACAGAACATTCGGAGATCCACCATCACAA AGAGCAGCAGAGGATATTGCATTCGCTGTAGCTCGTTTCTTTGCAAAGAA TGGAACTCTTACAAACTATTACATGGTATATATATATATATATATATATA TATATATATATATATATATTGATGTAATCTGCTTATTTTCTCGTAAACCT TAATTTAATCATATCTAAATTAATCATACAATCTATGTTATACAGTACTA TGGTGGAACCAACTATGGAAGGACAGGCTCATCATTCGTGACAACTCGTT ACTATGATGAAGCTCCCCTTGATGAGTTCGGTTTGTATAGGGAACCAAAA TGGAGTCATTTGAGGGATTTACACAGGGCTTTGAGGCTATCC |
| Genomic location of SSR248
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| User comments |
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