SGN Marker SSR248
SGN-M921
Synonyms |
Locus associations |
SSR info |
Annealing temperatures: Low: 47.619 High: 50
Repeat motif: TA Repeat number: 21
Repeat motif: Repeat number:
Forward primer: GCATTCGCTGTAGCTCGTTT
Reverse primer: GGGAGCTTCATCATAGTAACG
Predicted size: 249
Derivations |
This marker was derived from EST read SGN-E142359
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| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Tomato-EXPEN 2000 |
Other PCR data |
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Overgo hybridization and physical mapping |
SSR248 was used as an overgo probe on plate 1 [well H3]
Plausible BAC Matches: P310K19, P150P13, P212C02, P282B09, P033C24, P008L22, P255P03, P141I23, P094C13, P315E21, P045P14, P022F15, P206B22, P229E06, P053C17, P101M13, P322I21, P094L13, P074M01, P247J01, P294M03
Overgo Sequences
A sequence
GAACATTCGGAGATCCACCATCAC
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B sequence
TCCTCTGCTGCTCTTTGTGATGGT
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AB sequence
GAACATTCGGAGATCCACCATCACAAAGAG
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Marker sequence
GAAAGGGATGCACCTCCACATATCATCAACACATGCAACGGAAGACATTG
TGGAGATACATTCACAGGTCCCAACGGTCCTAACAAACCTTCTCTATGGA CTGAAAATTGGACCGCTCAGTACAGAACATTCGGAGATCCACCATCACAA AGAGCAGCAGAGGATATTGCATTCGCTGTAGCTCGTTTCTTTGCAAAGAA TGGAACTCTTACAAACTATTACATGGTATATATATATATATATATATATA TATATATATATATATATATTGATGTAATCTGCTTATTTTCTCGTAAACCT TAATTTAATCATATCTAAATTAATCATACAATCTATGTTATACAGTACTA TGGTGGAACCAACTATGGAAGGACAGGCTCATCATTCGTGACAACTCGTT ACTATGATGAAGCTCCCCTTGATGAGTTCGGTTTGTATAGGGAACCAAAA TGGAGTCATTTGAGGGATTTACACAGGGCTTTGAGGCTATCC |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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