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Tomato locus sucrose accumulator
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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sucrose accumulator is a TGRC gene
sucrose accumulator is on PhyloGenes
TomDelDB genotype frequencies in tomato populations. chromosome SL2.50ch03, position: 53853364
Please cite Razifard et al.
Registry name: | None | [Associate registry name] |
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Image | Description | Type |
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![]() ![]() | View sucrose accumulator relationships in the stand-alone network browser |
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![]() ![]() | unprocessed genomic sequence region underlying this gene |
>Solyc03g083910.2 SL2.50ch03:53855368..53851092 (sequence from reverse strand)
TTGGTCCCAGTCATTTTCTGTGTTCATCACCTATATATATAGCAGTAGACTAGTAGCTTCTCCCATTCCTCTATCTTCTATTATGGCCACTCAGTGTTATGACCCCGAAAACTCCGCCTCTCGTTACACATTACTCCCGGATCAACCCGATTCCGGCCACCGGAAGTCCCTTAAAATCATCTCCGGCATTTTCCTCTCCGTTTTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAACAACCAGTCACCGGACTTGCAAATCGACTCCCGTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGAGTCTCCGATAAAACTTTTCGAGATGTAGCCGGTGCTAGTCACGTTTCTTATGCGTGGTCCAATGCTATGCTTAGCTGGCAAAGAACGGCTTACCATTTTCAACCTCAAAAAAATTGGATGAACGGTAATTAACTTTCTTATTTTGACTTTTCTTTAATTTCTTTTTTATTTGATCTTAAAATTGAAATTATTTATAAATACTTATAACAGTTCTTTTTTTTCTCAATGATATTTATGGCTATTGATCTGTTGGGGGTATCTTTTGGATTCTGATTGGATGCTATTCTGCAGATCCTAATGGTGAGTTCAAAGTTAATTATTATCACTATTTTCTGCTAGTTTTTAATTAATTATATTCTTAAACTATGATTATAACTTTTAAAGCAATCTCATGAATGAGCAAATCATTAATTCGGGTGCTTATGTATATCATCTCGGTTAATCCTTTTACCTTATACTCAAAAACAAATATTACTCCCTTCAAAATAATTGATGTTTGACATAATCAATGTGATGTTTAATTTTTTTTTCTTTCAAATTTGCCCTTCCTAACCCCTATAATGATTATGTCAAATCCAAAGTGAAAAGACTATCATAATTACATATGCTTTAGTCACAATTAATTCATGTTAAATCATCAATAGTTTTGGATTGGAGGGAGTACTCATTAGGAAAAATAATTAAGCTAAATCATTCTTATTTTCACTGTACATTATTTAGATTAAGGGTGAAATAGGGGAGGAATCAATTATCTTATTTTTCTAAATGGACAAGTATTTTGAAATAACAAATTTTAAGAAAACACGTCAAGTCAAATAGAGTAGGATGGATGGAGTAAATTCTAACCTTTCTAGATATTCATAAAAATTAGTTGAACAGACATTTTAATAAAGACCACAAGTTGATGAATTAAGCTTGTTGTTCCAATATAATTGGGATTAACATGAGATCTTGTGGCAGTAATGTTTTTTGCTTTTGTGCAATTTTCCAATAAAAAGAAAACACTTGATTGGGTCAGTATTATACAAGTTTGGAAACCAATCACGTTATGTGGGTCATACTTTTTTGTAGTAATGTAATAATACCAATAGTGGGGCCCCCACTCAAAGTAATCCATCTTCCACTTGATTTTTTTATTTTTTTTTGAAATGGAGTAGGTTATCTTGGCCGCTTAGCAATTACTATTATCATGAGTAAATGACGGAAATTATAAATTTTTAAGATAAAATTATTATTAATCTTTTATAATTTTATGGTTATAAAAGTCTCTCAAACTAATACAATAATATAAGCGCTGATACATGAGTCTGATGTGCGAGATACATTAATCTGATAGGTAAAAATGAGGAACTAGAAATTTATAAAACTAATATGAATAATGATAATAAGATAACTTAAATGTGAAATTTCTATCATTTCTCCTAACATACCACTAGTGAAATTTGTTTACGTATCTTGTTGAAGAAAATCTTATCCAAAAGTCAAAAATAAAAACTCGTGGCCAAATTTTCAAAAAAAAAGAAGGTTATCTTTTTGCCGCAAAAAGCATAGCAATTTTGGTACGGAACGTATTGAGATTTTGTAGAGTATTTTATAATTCAAATTGCATAGAAAAGTCTTACCTATACAAGTAAAAACTTTGAAATTTCTATTAACGTGAATAAATTGGTTAACAGGACCATTGTATCACAAGGGATGGTACCACCTTTTTTATCAATACAATCCAGATTCAGCTATTTGGGGAAATATCACATGGGGCCATGCTGTATCCAAGGACTTGATCCACTGGCTCTACTTGCCTTTTGCCATGGTTCCTGATCAATGGTATGATATTAACGGTGTCTGGACAGGGTCCGCTACCATCCTACCCGATGGTCAGATCATGATGCTTTATACCGGTGACACTGATGATTATGTGCAAGTGCAAAATCTTGCGTACCCCGCCAACTTATCTGATCCTCTCCTTCTAGACTGGGTCAAGTTCAAAGGCAACCCGGTTCTGGTTCCTCCACCCGGCATTGGTGTCAAGGACTTTAGAGACCCGACTACTGCTTGGACCGGACCACAAAATGGGCAATGGCTGTTAACAATCGGGTCTAAGATTGGTAAAACGGGTGTTGCACTTGTTTATGAAACTTCCAACTTCACAAGCTTTAAGCTATTGGATGGAGTGCTGCATGCGGTTCCGGGTACGGGTATGTGGGAGTGTGTGGACTTTTACCCGGTATCTACTAAAAAAACAAACGGGTTGGACACATCATATAACGGGCCGGGTGTAAAGCATGTGTTAAAAGCAAGTTTAGATGACAATAAGCAAGATCATTATGCTATTGGTACGTATGACTTGGGAAAGAACAAATGGACACCCGATAACCCGGAATTGGATTGTGGAATTGGGTTGAGACTAGACTATGGGAAATATTATGCATCAAAGACTTTTTATGACCCGAAGAAAGAACGAAGAGTACTGTGGGGATGGATTGGGGAAACTGACAGTGAATCTGCTGACCTGCAGAAGGGATGGGCATCTGTACAGGTATGGACTTGGATGAACACATTGTTTTGTTATTTTACTTTGCACCATACACAGCGTCTAGTTGTATCGTAATAATCATGGTAGGGAAATTTCTTATTTAGAGAAAGTTGTTATAATCAATGCATTTGTAGGTGAAGTAAATTCTGAATTGTATATGAAACGTGTCTAATAGTGTTTCGAAATAACAGAGTATTCCAAGGACAGTGCTTTACGACAAGAAGACAGGGACACATCTACTTCAGTGGCCAGTGGAAGAAATTGAAAGCTTAAGAGTGGGTGATCCTACTGTTAAGCAAGTCGATCTTCAACCAGGCTCAATTGAGCTACTCCGTGTTGACTCAGCTGCAGAGGTTTGTTGCGTTACTTTTGTTTTAAATTACAAACACGCGCTTAATCTGCAGTCCCAAAACTTGTTTAGCTATTGTGCAGTTGGATATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTTCAGGGAATAATTGAAGCAGATCATGTAGGTTTCAGTTGCTCTACTAGTGGAGGTGCTGCTAGCAGAGGCATTTTGGGACCATTTGGTGTCATAGTAATTGCTGATCAAACGCTATCTGAGCTAACGCCAGTTTACTTTTACATTTCTAAAGGAGCTGATGGTCGTGCAGAGACTCACTTCTGTGCTGATCAAACTAGGTTTGCTTTTCTATCTGGCACAATTAATTTGTCCTTGTAAAATGGAGATGGATAAAAGTAGCGGGTTGTTGATCTGATATATGCAGATCCTCTGAGGCTCCGGGAGTTGGTAAACAAGTTTATGGTAGTTCAGTACCTGTGTTGGACGGTGAAAAACATTCAATGAGATTATTGGTAAGTGATAATGATTCCCTTATTTTACCTTGATTTTATTCCATTTCTTCACTTCACAATAATTAAAGTACTTGGCAGTTGCATTTGAGTAAAAGGTTTTTTATAAACTGAATTTTAGGTGGATCACTCAATTGTGGAGAGCTTTGCTCAAGGAGGAAGAACAGTCATAACATCGCGAATTTACCCAACAAAGGCAGTAAATGGAGCAGCACGACTCTTTGTTTTCAACAATGCCACAGGGGCTAGCGTTACTGCCTCCGTCAAGATTTGGTCACTTGAGTCAGCTAATATTCAATCCTTCCCTTTGCAAGACTTGTAATCTTCTTTATTTCGTTTTTTTTCTTTTTCATTTGAAGGTTATTTCACCGACGTCCCATCAAGAAAGGGAAGAGGGAGATCAATATATGTAGTGTTATTCGCCCTACCTTAGGATTAGATGTCATCTAGCAATGTCAAATCTAGTAGAGTATACAATGTATGGGTTCCTGGAAACCGAGTAGAGCTTACCTGGATTCTATGTAAACTAAGAAAGCTCAGCAAATATATGCACAAATAATTTACAGAAACAACTTGGGAATGTTGACAAACT
TTGGTCCCAGTCATTTTCTGTGTTCATCACCTATATATATAGCAGTAGACTAGTAGCTTCTCCCATTCCTCTATCTTCTATTATGGCCACTCAGTGTTATGACCCCGAAAACTCCGCCTCTCGTTACACATTACTCCCGGATCAACCCGATTCCGGCCACCGGAAGTCCCTTAAAATCATCTCCGGCATTTTCCTCTCCGTTTTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAACAACCAGTCACCGGACTTGCAAATCGACTCCCGTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGAGTCTCCGATAAAACTTTTCGAGATGTAGCCGGTGCTAGTCACGTTTCTTATGCGTGGTCCAATGCTATGCTTAGCTGGCAAAGAACGGCTTACCATTTTCAACCTCAAAAAAATTGGATGAACGGTAATTAACTTTCTTATTTTGACTTTTCTTTAATTTCTTTTTTATTTGATCTTAAAATTGAAATTATTTATAAATACTTATAACAGTTCTTTTTTTTCTCAATGATATTTATGGCTATTGATCTGTTGGGGGTATCTTTTGGATTCTGATTGGATGCTATTCTGCAGATCCTAATGGTGAGTTCAAAGTTAATTATTATCACTATTTTCTGCTAGTTTTTAATTAATTATATTCTTAAACTATGATTATAACTTTTAAAGCAATCTCATGAATGAGCAAATCATTAATTCGGGTGCTTATGTATATCATCTCGGTTAATCCTTTTACCTTATACTCAAAAACAAATATTACTCCCTTCAAAATAATTGATGTTTGACATAATCAATGTGATGTTTAATTTTTTTTTCTTTCAAATTTGCCCTTCCTAACCCCTATAATGATTATGTCAAATCCAAAGTGAAAAGACTATCATAATTACATATGCTTTAGTCACAATTAATTCATGTTAAATCATCAATAGTTTTGGATTGGAGGGAGTACTCATTAGGAAAAATAATTAAGCTAAATCATTCTTATTTTCACTGTACATTATTTAGATTAAGGGTGAAATAGGGGAGGAATCAATTATCTTATTTTTCTAAATGGACAAGTATTTTGAAATAACAAATTTTAAGAAAACACGTCAAGTCAAATAGAGTAGGATGGATGGAGTAAATTCTAACCTTTCTAGATATTCATAAAAATTAGTTGAACAGACATTTTAATAAAGACCACAAGTTGATGAATTAAGCTTGTTGTTCCAATATAATTGGGATTAACATGAGATCTTGTGGCAGTAATGTTTTTTGCTTTTGTGCAATTTTCCAATAAAAAGAAAACACTTGATTGGGTCAGTATTATACAAGTTTGGAAACCAATCACGTTATGTGGGTCATACTTTTTTGTAGTAATGTAATAATACCAATAGTGGGGCCCCCACTCAAAGTAATCCATCTTCCACTTGATTTTTTTATTTTTTTTTGAAATGGAGTAGGTTATCTTGGCCGCTTAGCAATTACTATTATCATGAGTAAATGACGGAAATTATAAATTTTTAAGATAAAATTATTATTAATCTTTTATAATTTTATGGTTATAAAAGTCTCTCAAACTAATACAATAATATAAGCGCTGATACATGAGTCTGATGTGCGAGATACATTAATCTGATAGGTAAAAATGAGGAACTAGAAATTTATAAAACTAATATGAATAATGATAATAAGATAACTTAAATGTGAAATTTCTATCATTTCTCCTAACATACCACTAGTGAAATTTGTTTACGTATCTTGTTGAAGAAAATCTTATCCAAAAGTCAAAAATAAAAACTCGTGGCCAAATTTTCAAAAAAAAAGAAGGTTATCTTTTTGCCGCAAAAAGCATAGCAATTTTGGTACGGAACGTATTGAGATTTTGTAGAGTATTTTATAATTCAAATTGCATAGAAAAGTCTTACCTATACAAGTAAAAACTTTGAAATTTCTATTAACGTGAATAAATTGGTTAACAGGACCATTGTATCACAAGGGATGGTACCACCTTTTTTATCAATACAATCCAGATTCAGCTATTTGGGGAAATATCACATGGGGCCATGCTGTATCCAAGGACTTGATCCACTGGCTCTACTTGCCTTTTGCCATGGTTCCTGATCAATGGTATGATATTAACGGTGTCTGGACAGGGTCCGCTACCATCCTACCCGATGGTCAGATCATGATGCTTTATACCGGTGACACTGATGATTATGTGCAAGTGCAAAATCTTGCGTACCCCGCCAACTTATCTGATCCTCTCCTTCTAGACTGGGTCAAGTTCAAAGGCAACCCGGTTCTGGTTCCTCCACCCGGCATTGGTGTCAAGGACTTTAGAGACCCGACTACTGCTTGGACCGGACCACAAAATGGGCAATGGCTGTTAACAATCGGGTCTAAGATTGGTAAAACGGGTGTTGCACTTGTTTATGAAACTTCCAACTTCACAAGCTTTAAGCTATTGGATGGAGTGCTGCATGCGGTTCCGGGTACGGGTATGTGGGAGTGTGTGGACTTTTACCCGGTATCTACTAAAAAAACAAACGGGTTGGACACATCATATAACGGGCCGGGTGTAAAGCATGTGTTAAAAGCAAGTTTAGATGACAATAAGCAAGATCATTATGCTATTGGTACGTATGACTTGGGAAAGAACAAATGGACACCCGATAACCCGGAATTGGATTGTGGAATTGGGTTGAGACTAGACTATGGGAAATATTATGCATCAAAGACTTTTTATGACCCGAAGAAAGAACGAAGAGTACTGTGGGGATGGATTGGGGAAACTGACAGTGAATCTGCTGACCTGCAGAAGGGATGGGCATCTGTACAGGTATGGACTTGGATGAACACATTGTTTTGTTATTTTACTTTGCACCATACACAGCGTCTAGTTGTATCGTAATAATCATGGTAGGGAAATTTCTTATTTAGAGAAAGTTGTTATAATCAATGCATTTGTAGGTGAAGTAAATTCTGAATTGTATATGAAACGTGTCTAATAGTGTTTCGAAATAACAGAGTATTCCAAGGACAGTGCTTTACGACAAGAAGACAGGGACACATCTACTTCAGTGGCCAGTGGAAGAAATTGAAAGCTTAAGAGTGGGTGATCCTACTGTTAAGCAAGTCGATCTTCAACCAGGCTCAATTGAGCTACTCCGTGTTGACTCAGCTGCAGAGGTTTGTTGCGTTACTTTTGTTTTAAATTACAAACACGCGCTTAATCTGCAGTCCCAAAACTTGTTTAGCTATTGTGCAGTTGGATATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTTCAGGGAATAATTGAAGCAGATCATGTAGGTTTCAGTTGCTCTACTAGTGGAGGTGCTGCTAGCAGAGGCATTTTGGGACCATTTGGTGTCATAGTAATTGCTGATCAAACGCTATCTGAGCTAACGCCAGTTTACTTTTACATTTCTAAAGGAGCTGATGGTCGTGCAGAGACTCACTTCTGTGCTGATCAAACTAGGTTTGCTTTTCTATCTGGCACAATTAATTTGTCCTTGTAAAATGGAGATGGATAAAAGTAGCGGGTTGTTGATCTGATATATGCAGATCCTCTGAGGCTCCGGGAGTTGGTAAACAAGTTTATGGTAGTTCAGTACCTGTGTTGGACGGTGAAAAACATTCAATGAGATTATTGGTAAGTGATAATGATTCCCTTATTTTACCTTGATTTTATTCCATTTCTTCACTTCACAATAATTAAAGTACTTGGCAGTTGCATTTGAGTAAAAGGTTTTTTATAAACTGAATTTTAGGTGGATCACTCAATTGTGGAGAGCTTTGCTCAAGGAGGAAGAACAGTCATAACATCGCGAATTTACCCAACAAAGGCAGTAAATGGAGCAGCACGACTCTTTGTTTTCAACAATGCCACAGGGGCTAGCGTTACTGCCTCCGTCAAGATTTGGTCACTTGAGTCAGCTAATATTCAATCCTTCCCTTTGCAAGACTTGTAATCTTCTTTATTTCGTTTTTTTTCTTTTTCATTTGAAGGTTATTTCACCGACGTCCCATCAAGAAAGGGAAGAGGGAGATCAATATATGTAGTGTTATTCGCCCTACCTTAGGATTAGATGTCATCTAGCAATGTCAAATCTAGTAGAGTATACAATGTATGGGTTCCTGGAAACCGAGTAGAGCTTACCTGGATTCTATGTAAACTAAGAAAGCTCAGCAAATATATGCACAAATAATTTACAGAAACAACTTGGGAATGTTGACAAACT
Download sequence region |
Get flanking sequences on SL2.50ch03
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![]() ![]() | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>Solyc03g083910.2.1 Acid beta-fructofuranosidase (AHRD V1 **-- Q575T1_WHEAT); contains Interpro domain(s) IPR001362 Glycoside hydrolase, family 32
TTGGTCCCAGTCATTTTCTGTGTTCATCACCTATATATATAGCAGTAGACTAGTAGCTTCTCCCATTCCTCTATCTTCTATTATGGCCACTCAGTGTTATGACCCCGAAAACTCCGCCTCTCGTTACACATTACTCCCGGATCAACCCGATTCCGGCCACCGGAAGTCCCTTAAAATCATCTCCGGCATTTTCCTCTCCGTTTTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAACAACCAGTCACCGGACTTGCAAATCGACTCCCGTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGAGTCTCCGATAAAACTTTTCGAGATGTAGCCGGTGCTAGTCACGTTTCTTATGCGTGGTCCAATGCTATGCTTAGCTGGCAAAGAACGGCTTACCATTTTCAACCTCAAAAAAATTGGATGAACGATCCTAATGGACCATTGTATCACAAGGGATGGTACCACCTTTTTTATCAATACAATCCAGATTCAGCTATTTGGGGAAATATCACATGGGGCCATGCTGTATCCAAGGACTTGATCCACTGGCTCTACTTGCCTTTTGCCATGGTTCCTGATCAATGGTATGATATTAACGGTGTCTGGACAGGGTCCGCTACCATCCTACCCGATGGTCAGATCATGATGCTTTATACCGGTGACACTGATGATTATGTGCAAGTGCAAAATCTTGCGTACCCCGCCAACTTATCTGATCCTCTCCTTCTAGACTGGGTCAAGTTCAAAGGCAACCCGGTTCTGGTTCCTCCACCCGGCATTGGTGTCAAGGACTTTAGAGACCCGACTACTGCTTGGACCGGACCACAAAATGGGCAATGGCTGTTAACAATCGGGTCTAAGATTGGTAAAACGGGTGTTGCACTTGTTTATGAAACTTCCAACTTCACAAGCTTTAAGCTATTGGATGGAGTGCTGCATGCGGTTCCGGGTACGGGTATGTGGGAGTGTGTGGACTTTTACCCGGTATCTACTAAAAAAACAAACGGGTTGGACACATCATATAACGGGCCGGGTGTAAAGCATGTGTTAAAAGCAAGTTTAGATGACAATAAGCAAGATCATTATGCTATTGGTACGTATGACTTGGGAAAGAACAAATGGACACCCGATAACCCGGAATTGGATTGTGGAATTGGGTTGAGACTAGACTATGGGAAATATTATGCATCAAAGACTTTTTATGACCCGAAGAAAGAACGAAGAGTACTGTGGGGATGGATTGGGGAAACTGACAGTGAATCTGCTGACCTGCAGAAGGGATGGGCATCTGTACAGAGTATTCCAAGGACAGTGCTTTACGACAAGAAGACAGGGACACATCTACTTCAGTGGCCAGTGGAAGAAATTGAAAGCTTAAGAGTGGGTGATCCTACTGTTAAGCAAGTCGATCTTCAACCAGGCTCAATTGAGCTACTCCGTGTTGACTCAGCTGCAGAGTTGGATATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTTCAGGGAATAATTGAAGCAGATCATGTAGGTTTCAGTTGCTCTACTAGTGGAGGTGCTGCTAGCAGAGGCATTTTGGGACCATTTGGTGTCATAGTAATTGCTGATCAAACGCTATCTGAGCTAACGCCAGTTTACTTTTACATTTCTAAAGGAGCTGATGGTCGTGCAGAGACTCACTTCTGTGCTGATCAAACTAGGTTTGCTTTTCTATCTGGCACAATTAATTTGTCCTTATCCTCTGAGGCTCCGGGAGTTGGTAAACAAGTTTATGGTAGTTCAGTACCTGTGTTGGACGGTGAAAAACATTCAATGAGATTATTGGTGGATCACTCAATTGTGGAGAGCTTTGCTCAAGGAGGAAGAACAGTCATAACATCGCGAATTTACCCAACAAAGGCAGTAAATGGAGCAGCACGACTCTTTGTTTTCAACAATGCCACAGGGGCTAGCGTTACTGCCTCCGTCAAGATTTGGTCACTTGAGTCAGCTAATATTCAATCCTTCCCTTTGCAAGACTTGTAATCTTCTTTATTTCGTTTTTTTTCTTTTTCATTTGAAGGTTATTTCACCGACGTCCCATCAAGAAAGGGAAGAGGGAGATCAATATATGTAGTGTTATTCGCCCTACCTTAGGATTAGATGTCATCTAGCAATGTCAAATCTAGTAGAGTATACAATGTATGGGTTCCTGGAAACCGAGTAGAGCTTACCTGGATTCTATGTAAACTAAGAAAGCTCAGCAAATATATGCACAAATAATTTACAGAAACAACTTGGGAATGTTGACAAACT
TTGGTCCCAGTCATTTTCTGTGTTCATCACCTATATATATAGCAGTAGACTAGTAGCTTCTCCCATTCCTCTATCTTCTATTATGGCCACTCAGTGTTATGACCCCGAAAACTCCGCCTCTCGTTACACATTACTCCCGGATCAACCCGATTCCGGCCACCGGAAGTCCCTTAAAATCATCTCCGGCATTTTCCTCTCCGTTTTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAACAACCAGTCACCGGACTTGCAAATCGACTCCCGTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGAGTCTCCGATAAAACTTTTCGAGATGTAGCCGGTGCTAGTCACGTTTCTTATGCGTGGTCCAATGCTATGCTTAGCTGGCAAAGAACGGCTTACCATTTTCAACCTCAAAAAAATTGGATGAACGATCCTAATGGACCATTGTATCACAAGGGATGGTACCACCTTTTTTATCAATACAATCCAGATTCAGCTATTTGGGGAAATATCACATGGGGCCATGCTGTATCCAAGGACTTGATCCACTGGCTCTACTTGCCTTTTGCCATGGTTCCTGATCAATGGTATGATATTAACGGTGTCTGGACAGGGTCCGCTACCATCCTACCCGATGGTCAGATCATGATGCTTTATACCGGTGACACTGATGATTATGTGCAAGTGCAAAATCTTGCGTACCCCGCCAACTTATCTGATCCTCTCCTTCTAGACTGGGTCAAGTTCAAAGGCAACCCGGTTCTGGTTCCTCCACCCGGCATTGGTGTCAAGGACTTTAGAGACCCGACTACTGCTTGGACCGGACCACAAAATGGGCAATGGCTGTTAACAATCGGGTCTAAGATTGGTAAAACGGGTGTTGCACTTGTTTATGAAACTTCCAACTTCACAAGCTTTAAGCTATTGGATGGAGTGCTGCATGCGGTTCCGGGTACGGGTATGTGGGAGTGTGTGGACTTTTACCCGGTATCTACTAAAAAAACAAACGGGTTGGACACATCATATAACGGGCCGGGTGTAAAGCATGTGTTAAAAGCAAGTTTAGATGACAATAAGCAAGATCATTATGCTATTGGTACGTATGACTTGGGAAAGAACAAATGGACACCCGATAACCCGGAATTGGATTGTGGAATTGGGTTGAGACTAGACTATGGGAAATATTATGCATCAAAGACTTTTTATGACCCGAAGAAAGAACGAAGAGTACTGTGGGGATGGATTGGGGAAACTGACAGTGAATCTGCTGACCTGCAGAAGGGATGGGCATCTGTACAGAGTATTCCAAGGACAGTGCTTTACGACAAGAAGACAGGGACACATCTACTTCAGTGGCCAGTGGAAGAAATTGAAAGCTTAAGAGTGGGTGATCCTACTGTTAAGCAAGTCGATCTTCAACCAGGCTCAATTGAGCTACTCCGTGTTGACTCAGCTGCAGAGTTGGATATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTTCAGGGAATAATTGAAGCAGATCATGTAGGTTTCAGTTGCTCTACTAGTGGAGGTGCTGCTAGCAGAGGCATTTTGGGACCATTTGGTGTCATAGTAATTGCTGATCAAACGCTATCTGAGCTAACGCCAGTTTACTTTTACATTTCTAAAGGAGCTGATGGTCGTGCAGAGACTCACTTCTGTGCTGATCAAACTAGGTTTGCTTTTCTATCTGGCACAATTAATTTGTCCTTATCCTCTGAGGCTCCGGGAGTTGGTAAACAAGTTTATGGTAGTTCAGTACCTGTGTTGGACGGTGAAAAACATTCAATGAGATTATTGGTGGATCACTCAATTGTGGAGAGCTTTGCTCAAGGAGGAAGAACAGTCATAACATCGCGAATTTACCCAACAAAGGCAGTAAATGGAGCAGCACGACTCTTTGTTTTCAACAATGCCACAGGGGCTAGCGTTACTGCCTCCGTCAAGATTTGGTCACTTGAGTCAGCTAATATTCAATCCTTCCCTTTGCAAGACTTGTAATCTTCTTTATTTCGTTTTTTTTCTTTTTCATTTGAAGGTTATTTCACCGACGTCCCATCAAGAAAGGGAAGAGGGAGATCAATATATGTAGTGTTATTCGCCCTACCTTAGGATTAGATGTCATCTAGCAATGTCAAATCTAGTAGAGTATACAATGTATGGGTTCCTGGAAACCGAGTAGAGCTTACCTGGATTCTATGTAAACTAAGAAAGCTCAGCAAATATATGCACAAATAATTTACAGAAACAACTTGGGAATGTTGACAAACT
![]() ![]() | translated polypeptide sequence |
>Solyc03g083910.2.1 Acid beta-fructofuranosidase (AHRD V1 **-- Q575T1_WHEAT); contains Interpro domain(s) IPR001362 Glycoside hydrolase, family 32
MATQCYDPENSASRYTLLPDQPDSGHRKSLKIISGIFLSVFLLLSVAFFPILNNQSPDLQIDSRSPAPPSRGVSQGVSDKTFRDVAGASHVSYAWSNAMLSWQRTAYHFQPQKNWMNDPNGPLYHKGWYHLFYQYNPDSAIWGNITWGHAVSKDLIHWLYLPFAMVPDQWYDINGVWTGSATILPDGQIMMLYTGDTDDYVQVQNLAYPANLSDPLLLDWVKFKGNPVLVPPPGIGVKDFRDPTTAWTGPQNGQWLLTIGSKIGKTGVALVYETSNFTSFKLLDGVLHAVPGTGMWECVDFYPVSTKKTNGLDTSYNGPGVKHVLKASLDDNKQDHYAIGTYDLGKNKWTPDNPELDCGIGLRLDYGKYYASKTFYDPKKERRVLWGWIGETDSESADLQKGWASVQSIPRTVLYDKKTGTHLLQWPVEEIESLRVGDPTVKQVDLQPGSIELLRVDSAAELDIEASFEVDKVALQGIIEADHVGFSCSTSGGAASRGILGPFGVIVIADQTLSELTPVYFYISKGADGRAETHFCADQTRFAFLSGTINLSLSSEAPGVGKQVYGSSVPVLDGEKHSMRLLVDHSIVESFAQGGRTVITSRIYPTKAVNGAARLFVFNNATGASVTASVKIWSLESANIQSFPLQDL*
MATQCYDPENSASRYTLLPDQPDSGHRKSLKIISGIFLSVFLLLSVAFFPILNNQSPDLQIDSRSPAPPSRGVSQGVSDKTFRDVAGASHVSYAWSNAMLSWQRTAYHFQPQKNWMNDPNGPLYHKGWYHLFYQYNPDSAIWGNITWGHAVSKDLIHWLYLPFAMVPDQWYDINGVWTGSATILPDGQIMMLYTGDTDDYVQVQNLAYPANLSDPLLLDWVKFKGNPVLVPPPGIGVKDFRDPTTAWTGPQNGQWLLTIGSKIGKTGVALVYETSNFTSFKLLDGVLHAVPGTGMWECVDFYPVSTKKTNGLDTSYNGPGVKHVLKASLDDNKQDHYAIGTYDLGKNKWTPDNPELDCGIGLRLDYGKYYASKTFYDPKKERRVLWGWIGETDSESADLQKGWASVQSIPRTVLYDKKTGTHLLQWPVEEIESLRVGDPTVKQVDLQPGSIELLRVDSAAELDIEASFEVDKVALQGIIEADHVGFSCSTSGGAASRGILGPFGVIVIADQTLSELTPVYFYISKGADGRAETHFCADQTRFAFLSGTINLSLSSEAPGVGKQVYGSSVPVLDGEKHSMRLLVDHSIVESFAQGGRTVITSRIYPTKAVNGAARLFVFNNATGASVTASVKIWSLESANIQSFPLQDL*
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![]() ![]() | [Associate new unigene] |
Unigene ID:
[loading...]
![]() ![]() | [Associate new genbank sequence] |
M81081 Tomato acid invertase (TIV1) mRNA, complete cds.
AF465612 Lycopersicon esculentum clone 1 minor allergen beta-fructofuranosidase precursor, mRNA, complete cds.
AF465613 Lycopersicon esculentum clone 2 minor allergen beta-fructofuranosidase precursor, mRNA, complete cds.
AF490530 Lycopersicon esculentum beta-fructofuranosidase TAI 20-19 mRNA, partial cds.
Z12025 L.esculentum beta-fructosidase mRNA for vacuolar invertase.
D11350 Solanum lycopersicum Aiv-1 mRNA for beta-fructosidase, complete cds.
X77264 L.esculentum mRNA for acid invertase.
S70040 acid invertase [Lycopersicon esculentum=tomatoes, cv. Super First, fruits, mRNA, 2372 nt].
AF465612 Lycopersicon esculentum clone 1 minor allergen beta-fructofuranosidase precursor, mRNA, complete cds.
AF465613 Lycopersicon esculentum clone 2 minor allergen beta-fructofuranosidase precursor, mRNA, complete cds.
AF490530 Lycopersicon esculentum beta-fructofuranosidase TAI 20-19 mRNA, partial cds.
Z12025 L.esculentum beta-fructosidase mRNA for vacuolar invertase.
D11350 Solanum lycopersicum Aiv-1 mRNA for beta-fructosidase, complete cds.
X77264 L.esculentum mRNA for acid invertase.
S70040 acid invertase [Lycopersicon esculentum=tomatoes, cv. Super First, fruits, mRNA, 2372 nt].
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
A novel cDNA clone for acid invertase in tomato fruit.
Idengaku zasshi (1992)
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Show / hide abstract
The sequence of a novel cDNA clone, Aiv-1, for tomato acid invertase was similar to that of TIV1 (Klann et al., 1992) for the enzyme except for a unique intron-like insertion. It is considered that Aiv-1 is derived from either an alternatively spliced mRNA for an isozyme or a pre-mRNA of TIV1.
Ohyama, A. Hirai, M. Nishimura, S.
Idengaku zasshi.
1992.
67(6).
491-2.
Intercellular localization of acid invertase in tomato fruit and molecular cloning of a cDNA for the enzyme.
Plant & cell physiology (1993)
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Show / hide abstract
The localization of acid invertase (AI, EC 3.2.1.26) in tomato fruits was studied. AI was localized in the intercellular fraction (cell wall fraction). A cDNA encoding a wall-bound form of AI from tomato fruits was cloned and its nucleotide sequence was determined. The cloned cDNA was 2363 base pairs long and contained an open reading frame of 1908 base pairs which encoded a polypeptide of 636 amino acids. RNA blot analysis indicated that the mRNA for the acid invertase was about 2.5 kb in length. The levels of the mRNA were low at the mature green stage but increased during ripening of fruit.
Sato, T. Iwatsubo, T. Takahashi, M. Nakagawa, H. Ogura, N. Mori, H.
Plant & cell physiology.
1993.
34(2).
263-9.
Isolation and characterization of fruit vacuolar invertase genes from two tomato species and temporal differences in mRNA levels during fruit ripening.
Plant molecular biology (1993)
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To determine the relationship between invertase gene expression and glucose and fructose accumulation in ripening tomato fruit, fruit vacuolar invertase cDNA and genomic clones from the cultivated species, Lycopersicon esculentum cv. UC82B, and a wild species, Lycopersicon pimpinellifolium, were isolated and characterized. The coding sequences of all cDNA clones examined are identical. By comparison to the known amino acid sequence of mature L. esculentum fruit vacuolar invertase, a putative signal sequence and putative amino-terminal and carboxy-terminal propeptides were identified in the derived amino acid sequence. Of the residues 42% are identical with those of carrot cell wall invertase. A putative catalytic site and a five-residue motif found in carrot, yeast, and bacterial invertases are also present in the tomato sequence. Minor differences between the nucleotide sequences of the genomic clones from the two tomato species were found in one intron and in the putative regulatory region. The gene appears to be present in one copy per haploid genome. Northern analysis suggests a different temporal pattern of vacuolar invertase mRNA levels during fruit development in the two species, with the invertase mRNA appearing at an earlier stage of fruit development in the wild species. Nucleotide differences found in the putative regulatory regions may be involved in species differences in temporal regulation of this gene, which in turn may contribute to observed differences in hexose accumulation in ripening fruit.
Elliott, KJ. Butler, WO. Dickinson, CD. Konno, Y. Vedvick, TS. Fitzmaurice, L. Mirkov, TE.
Plant molecular biology.
1993.
21(3).
515-24.
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