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Potato locus single-stranded DNA binding protein precursor
| Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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 Links to external databases
 Links to external databases
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| Registry name: | None | [Associate registry name] |
| Notes and figures (0)
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| Image | Description | Type |
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| Accessions and images (0)
Accessions and images (0)
| [Associate accession] |
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| Alleles (0) | None | [Add new Allele] |
| Associated loci (0)
Associated loci (0)
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| Associated loci - graphical view | None |
| SolCyc links
SolCyc links
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| Sequence annotations
Sequence annotations
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| Genome features
Genome features
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| Genomic sequence
Genomic sequence
| unprocessed genomic sequence region underlying this gene |
>PGSC0003DMG400021562 PGSC_DMv3_219_ch09:4000057..4004811
TGTAGAGGCATAGGCACAATAAACACACAATTCTATCTAATTCATTTGTAGAACAAGGATGCTTCGCGCTAAGATACATTTTCGAAGAGTATCAAACTTTTTCATTGTCTTGTCTGTCAACAAGTGATGGATAGAATCATATTACAAGATCAGAATTTCTTCCTGAGGCAATTTCAGAACATACATTACGAAAACTAATTTACTTGAGAGCTCTAGTTAGTCCAGAAGTAGAGAGTAGTTTGTCCGCGCAAGTTTAAGATAGCTGTTGCAAAGTTCATAACTCATTCATTTCTGCAACTATCGTCACCTCCTGGACCCTGCCATGTAAATTATTCACTTTTGTAAACAGAAGCATATATTTTGGTTCGACTTTTGAAACTTATATTACTTGGCTTGCTAATCGCATGACAATTGAACATAGATATATTGATGAATTTCAAGATGTGAAGACTCAAGAAACAGCCCAGAAAAAGAGAGCACGCGAGTTGTTTACCTCAAGCCTTTTCTCGGTCAAAAAGATGTTGGCTACAATCTTCAGAATTGACGTCTGGGTGGACGAGCTTCAGCAGGACTTACACGGATGGCCCTGCCACCTAGGTCCTACACACCACAAAGTTTAACATGGAAAAACAATCAAAAGCACGATCAACAAAGCAGTAGTAATTATAAGTATGACTAAAAGCTCATTTTACTAGAAGAAAATCATATAGAAGTTTGTAGAAAAGAATGCAAAACAGATTCATAAATAACATTATACCAGACTAGATCGACGGTATATTACATATCTACAAACGCAGACAAGTCAAAGGGAAAAATATCTAGAAGATTGAAACCCACGCCTGATAACTATATAATCATGCATATTTACATCGTCATTTAGAAGACATATTGCGGGTAAAACTGATCCAACACTCTAAACCATGCAAATCACATAACATTAAGTAGCATGCACTACACCAAAAATGATCTTTAGCGGCAATAGCTTAATTGCCGCTAAACATATATTTTTAGCGGCAATTCGCACTCTTTGTAAGTGTCCCTAAAGTTTATAACGACATTGGATCCAATGACAATAAACTAATGCCAGTAAAGGCTTAGCACTCTTTGTTTAATGTGTATATTTATTCCCGCTAAAAGTTATTTTTGTTGTAGTGATGACATATATCATCTGGGGGGGGGGGGGGGGGGGGCAACAGACGATAACATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGTTACAACAGACTAGTACATGTGAATGTTAAGCCGGTACAAAACCAGCCTGAATGGAAAATGAGATCAACGTGTGAAGACACATGCACATACAAAACATAAAGAAAGATAATTGTTTAGCTGAGTAAGGATGACTTACAACACCATCCAAGCTTTCAATTGCATCGTTGACCTCCTTAGCGGAACTGTATGTTACAAATCCAAAGCCCCTTGATCTACCGCTATCTCTATCATAGACTACTTTGGCATCCACGACCTTTCCTTGCTCACTGAACAAGGTCTCAAGTTGCTGTTGGTCAACACTCCATGCAAGGTTTCCTACGTAGACTCTGTTGGAACTGTCCATACTCCCTCCACCCCTACCTCCCTGGTAAGAAGAATTGTCCCCGAAAGAATTCTCCCTTTTGGGTGGTGCTGGCCCAGAATTCACCCTCAGTGCCCTCCCGTCAATTTCCTGCCAAAGGAATCAATTATGCTTAGTGTTGAATTTCAGCAAAGAAATTTTGCATAAAGAAAGTATTACTAATAACAAGCGTATTAGGATCCACAAAATGATGGTTGAGAATGAGAGCTGAAATCACTTAATCAGCAATTTTTATAGTTTTTTTTTTTTGTGTGTGTGTGTGTGTGGTGGGGGGGGGGATTTCATCATCAAAATTAGTATTGAAATCTGCAGTATGGCACATTGCAAAATATGTTAATATTAAAAGGGAGTACTGGTCTTCCGTTATACCATTTTTAAAATTGTTAACTGAACACAACAATTGAATTCCAAAAATAGATTAAGCTATCCAAGAACACGGAAATTCAGGACTTAAGGGAATATTTGGACACACACGTTAGAGCATAATAACCAAGAAAAGACAACAAAGCAAAAGACTTTACATAGCCATTAAATTGTTGACAGGCGGCTTCAACTGCCTCTTTGGAGGACATTGTCACAAAGCCAAAACCTCTGCTTCTTCCTGTAAGCTTGTCATAGATAACCTGCAAAAGTTAGCAGCTCCAGTAAGTCCGATTAAACCTCTTATCCAATTCTTCACATCCTCACTCTCCCAATCAAGATTGAAAACAACAACCATTTATGCTAAAGTCACACAATAAGATTATATCAATAACAAAACCTTAAATGCTCAACATGGTTGCCTATTCAAACATTGCCAAGCGGAATTTCAATTTAACAAGTCCATTAGCCTACCATAAAATCCTTAATATCCTAACTGTACACCAAAAAATCAAGAAGCCGGAACAATTTCCTTCTATAACACCTTAAGGCATAAATAAAAACTTCTTCTATATGACAAGGGAACCACACTCCTTTGCCATAGCTTGCAAACCACACACGAGGGGTAAACCGCACTAGGCAAACCCCGTGCAACGAGCTCACCCCAGAAGGCCAACCCATACTGTCACAGGCAAGGGGTTTCGAACTTGAGACCTCCATTAGGGAAGTCTCAAGTCAAACCATTTGAGCAACCCCAAAGGATTCGTAAAGCATAAATAAACTTATCCAGTAAAAACCTTGTTGAATAGTATAAAAAGCCTCATCTTAAAGTTTAACTTGTTATGATAAGACACATTTACTTGTTACTCTTAGATATGTTATATATCCCCTCATGTATGGGATTGCTCTGATAATAGGTTGAATTGTGGGAACATCTTATCTAACAGACTAAACTGTCAGAAATAGCCACTTTACTACTTTCAGGTTAGCACAAATCATAAATAATCAAAATTCACAAGGTTAGTTATTTAAACATAGCCAAACAAAACTTCAAATCATCTAAACAAGAAGCCTACTTAAAAACAATTAATCATTTACTGCTCTATTAACCTGTTGAATTTTGTGAACATCTTATCTACTCAGAGATAGCCACTTCAATTTTACTACTTTTATGATTAGCAGACCTTAAAGATACAAACTTCACAAGGGTTCTCACTTAAACATAGCCAAACAATCCCTCAAAACTATATAAACACATAAACCCCACAAATAAGATTAAATCTTTCTCCCTTAACAATGCATTACAATTTACAAGCAGCAAAGTTTAATAAACACTTCAATTTCACTACTTTTTTTTATGAAAAGGGAACCCAGTGCAGCTACCTTTGGATGCACACAAGGTAAACCCCACTCCTATCCAATAGCTCGCAAACAATGCAAGCCCAGTGGGACGAGATCGACCCAAAAGGCCAATTCTACTACTTTTAGGTTTGCAAAGATTCAATTTTTTATTACCTCAACCATAGCAAACAAAACCTCAAATTACCAAAACAACTAAACCCCACAAAAAAAGATTGAATCTTTTAATTACCTCAACCATTTCAACATCTCCAGCACGCTCAAAAAGCTCAGCAAGAGCCGCACTGTCAACACTGAAAGGCAAATTACCAACAAAGATTTTAAGGTCAGGATTGGCATTACGTTCTTCATATGAAGCACCTTCATCACTCAAACCCCCCTCCTCCTCATCATCATCACCAGCCTCAACTTCCTCAATTTGGTCAAAATCAGAAAGGGTTACTTTACGAACAAAACGAGAAGATTCGAAGTTTCTTGGGGTTGAAGAAGATGATAAAGAAAGGTTTAAAGAGGAAGGAGGAAGTGAAAAGAAGGAAATTGAAGTTGTTTGGGAAGTGGGTTTTGGGAGTGTTTGTGGTGTAAGTGAAAGGAAATGGAGGGAAGAAGAAGAAGAAGCCATTGGAGAAGGGGTTGAAGAAAATTTTGAAGATAAGGTTTTTATTGAAGCAAAAGAATTGTGAAGACAGAGTGTGTTGTATGTA
TGTAGAGGCATAGGCACAATAAACACACAATTCTATCTAATTCATTTGTAGAACAAGGATGCTTCGCGCTAAGATACATTTTCGAAGAGTATCAAACTTTTTCATTGTCTTGTCTGTCAACAAGTGATGGATAGAATCATATTACAAGATCAGAATTTCTTCCTGAGGCAATTTCAGAACATACATTACGAAAACTAATTTACTTGAGAGCTCTAGTTAGTCCAGAAGTAGAGAGTAGTTTGTCCGCGCAAGTTTAAGATAGCTGTTGCAAAGTTCATAACTCATTCATTTCTGCAACTATCGTCACCTCCTGGACCCTGCCATGTAAATTATTCACTTTTGTAAACAGAAGCATATATTTTGGTTCGACTTTTGAAACTTATATTACTTGGCTTGCTAATCGCATGACAATTGAACATAGATATATTGATGAATTTCAAGATGTGAAGACTCAAGAAACAGCCCAGAAAAAGAGAGCACGCGAGTTGTTTACCTCAAGCCTTTTCTCGGTCAAAAAGATGTTGGCTACAATCTTCAGAATTGACGTCTGGGTGGACGAGCTTCAGCAGGACTTACACGGATGGCCCTGCCACCTAGGTCCTACACACCACAAAGTTTAACATGGAAAAACAATCAAAAGCACGATCAACAAAGCAGTAGTAATTATAAGTATGACTAAAAGCTCATTTTACTAGAAGAAAATCATATAGAAGTTTGTAGAAAAGAATGCAAAACAGATTCATAAATAACATTATACCAGACTAGATCGACGGTATATTACATATCTACAAACGCAGACAAGTCAAAGGGAAAAATATCTAGAAGATTGAAACCCACGCCTGATAACTATATAATCATGCATATTTACATCGTCATTTAGAAGACATATTGCGGGTAAAACTGATCCAACACTCTAAACCATGCAAATCACATAACATTAAGTAGCATGCACTACACCAAAAATGATCTTTAGCGGCAATAGCTTAATTGCCGCTAAACATATATTTTTAGCGGCAATTCGCACTCTTTGTAAGTGTCCCTAAAGTTTATAACGACATTGGATCCAATGACAATAAACTAATGCCAGTAAAGGCTTAGCACTCTTTGTTTAATGTGTATATTTATTCCCGCTAAAAGTTATTTTTGTTGTAGTGATGACATATATCATCTGGGGGGGGGGGGGGGGGGGGCAACAGACGATAACATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGTTACAACAGACTAGTACATGTGAATGTTAAGCCGGTACAAAACCAGCCTGAATGGAAAATGAGATCAACGTGTGAAGACACATGCACATACAAAACATAAAGAAAGATAATTGTTTAGCTGAGTAAGGATGACTTACAACACCATCCAAGCTTTCAATTGCATCGTTGACCTCCTTAGCGGAACTGTATGTTACAAATCCAAAGCCCCTTGATCTACCGCTATCTCTATCATAGACTACTTTGGCATCCACGACCTTTCCTTGCTCACTGAACAAGGTCTCAAGTTGCTGTTGGTCAACACTCCATGCAAGGTTTCCTACGTAGACTCTGTTGGAACTGTCCATACTCCCTCCACCCCTACCTCCCTGGTAAGAAGAATTGTCCCCGAAAGAATTCTCCCTTTTGGGTGGTGCTGGCCCAGAATTCACCCTCAGTGCCCTCCCGTCAATTTCCTGCCAAAGGAATCAATTATGCTTAGTGTTGAATTTCAGCAAAGAAATTTTGCATAAAGAAAGTATTACTAATAACAAGCGTATTAGGATCCACAAAATGATGGTTGAGAATGAGAGCTGAAATCACTTAATCAGCAATTTTTATAGTTTTTTTTTTTTGTGTGTGTGTGTGTGTGGTGGGGGGGGGGATTTCATCATCAAAATTAGTATTGAAATCTGCAGTATGGCACATTGCAAAATATGTTAATATTAAAAGGGAGTACTGGTCTTCCGTTATACCATTTTTAAAATTGTTAACTGAACACAACAATTGAATTCCAAAAATAGATTAAGCTATCCAAGAACACGGAAATTCAGGACTTAAGGGAATATTTGGACACACACGTTAGAGCATAATAACCAAGAAAAGACAACAAAGCAAAAGACTTTACATAGCCATTAAATTGTTGACAGGCGGCTTCAACTGCCTCTTTGGAGGACATTGTCACAAAGCCAAAACCTCTGCTTCTTCCTGTAAGCTTGTCATAGATAACCTGCAAAAGTTAGCAGCTCCAGTAAGTCCGATTAAACCTCTTATCCAATTCTTCACATCCTCACTCTCCCAATCAAGATTGAAAACAACAACCATTTATGCTAAAGTCACACAATAAGATTATATCAATAACAAAACCTTAAATGCTCAACATGGTTGCCTATTCAAACATTGCCAAGCGGAATTTCAATTTAACAAGTCCATTAGCCTACCATAAAATCCTTAATATCCTAACTGTACACCAAAAAATCAAGAAGCCGGAACAATTTCCTTCTATAACACCTTAAGGCATAAATAAAAACTTCTTCTATATGACAAGGGAACCACACTCCTTTGCCATAGCTTGCAAACCACACACGAGGGGTAAACCGCACTAGGCAAACCCCGTGCAACGAGCTCACCCCAGAAGGCCAACCCATACTGTCACAGGCAAGGGGTTTCGAACTTGAGACCTCCATTAGGGAAGTCTCAAGTCAAACCATTTGAGCAACCCCAAAGGATTCGTAAAGCATAAATAAACTTATCCAGTAAAAACCTTGTTGAATAGTATAAAAAGCCTCATCTTAAAGTTTAACTTGTTATGATAAGACACATTTACTTGTTACTCTTAGATATGTTATATATCCCCTCATGTATGGGATTGCTCTGATAATAGGTTGAATTGTGGGAACATCTTATCTAACAGACTAAACTGTCAGAAATAGCCACTTTACTACTTTCAGGTTAGCACAAATCATAAATAATCAAAATTCACAAGGTTAGTTATTTAAACATAGCCAAACAAAACTTCAAATCATCTAAACAAGAAGCCTACTTAAAAACAATTAATCATTTACTGCTCTATTAACCTGTTGAATTTTGTGAACATCTTATCTACTCAGAGATAGCCACTTCAATTTTACTACTTTTATGATTAGCAGACCTTAAAGATACAAACTTCACAAGGGTTCTCACTTAAACATAGCCAAACAATCCCTCAAAACTATATAAACACATAAACCCCACAAATAAGATTAAATCTTTCTCCCTTAACAATGCATTACAATTTACAAGCAGCAAAGTTTAATAAACACTTCAATTTCACTACTTTTTTTTATGAAAAGGGAACCCAGTGCAGCTACCTTTGGATGCACACAAGGTAAACCCCACTCCTATCCAATAGCTCGCAAACAATGCAAGCCCAGTGGGACGAGATCGACCCAAAAGGCCAATTCTACTACTTTTAGGTTTGCAAAGATTCAATTTTTTATTACCTCAACCATAGCAAACAAAACCTCAAATTACCAAAACAACTAAACCCCACAAAAAAAGATTGAATCTTTTAATTACCTCAACCATTTCAACATCTCCAGCACGCTCAAAAAGCTCAGCAAGAGCCGCACTGTCAACACTGAAAGGCAAATTACCAACAAAGATTTTAAGGTCAGGATTGGCATTACGTTCTTCATATGAAGCACCTTCATCACTCAAACCCCCCTCCTCCTCATCATCATCACCAGCCTCAACTTCCTCAATTTGGTCAAAATCAGAAAGGGTTACTTTACGAACAAAACGAGAAGATTCGAAGTTTCTTGGGGTTGAAGAAGATGATAAAGAAAGGTTTAAAGAGGAAGGAGGAAGTGAAAAGAAGGAAATTGAAGTTGTTTGGGAAGTGGGTTTTGGGAGTGTTTGTGGTGTAAGTGAAAGGAAATGGAGGGAAGAAGAAGAAGAAGCCATTGGAGAAGGGGTTGAAGAAAATTTTGAAGATAAGGTTTTTATTGAAGCAAAAGAATTGTGAAGACAGAGTGTGTTGTATGTA
| Download sequence region |
Get flanking sequences on PGSC_DMv3_219_ch09
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| mRNA PGSC0003DMT400055527
mRNA PGSC0003DMT400055527
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| Ontology terms | None | terms associated with this mRNA |
| cDNA sequence
cDNA sequence
| spliced cDNA sequence, including UTRs |
>PGSC0003DMT400055527 Single-stranded DNA binding protein
TACATACAACACACTCTGTCTTCACAATTCTTTTGCTTCAATAAAAACCTTATCTTCAAAATTTTCTTCAACCCCTTCTCCAATGGCTTCTTCTTCTTCTTCCCTCCATTTCCTTTCACTTACACCACAAACACTCCCAAAACCCACTTCCCAAACAACTTCAATTTCCTTCTTTTCACTTCCTCCTTCCTCTTTAAACCTTTCTTTATCATCTTCTTCAACCCCAAGAAACTTCGAATCTTCTCGTTTTGTTCGTAAAGTAACCCTTTCTGATTTTGACCAAATTGAGGAAGTTGAGGCTGGTGATGATGATGAGGAGGAGGGGGGTTTGAGTGATGAAGGTGCTTCATATGAAGAACGTAATGCCAATCCTGACCTTAAAATCTTTGTTGGTAATTTGCCTTTCAGTGTTGACAGTGCGGCTCTTGCTGAGCTTTTTGAGCGTGCTGGAGATGTTGAAATGGTTGAGGTTATCTATGACAAGCTTACAGGAAGAAGCAGAGGTTTTGGCTTTGTGACAATGTCCTCCAAAGAGGCAGTTGAAGCCGCCTGTCAACAATTTAATGGCTATGAAATTGACGGGAGGGCACTGAGGGTGAATTCTGGGCCAGCACCACCCAAAAGGGAGAATTCTTTCGGGGACAATTCTTCTTACCAGGGAGGTAGGGGTGGAGGGAGTATGGACAGTTCCAACAGAGTCTACGTAGGAAACCTTGCATGGAGTGTTGACCAACAGCAACTTGAGACCTTGTTCAGTGAGCAAGGAAAGGTCGTGGATGCCAAAGTAGTCTATGATAGAGATAGCGGTAGATCAAGGGGCTTTGGATTTGTAACATACAGTTCCGCTAAGGAGGTCAACGATGCAATTGAAAGCTTGGATGGTGTTGACCTAGGTGGCAGGGCCATCCGTGTAAGTCCTGCTGAAGCTCGTCCACCCAGACGTCAATTCTGAAGATTGTAGCCAACATCTTTTTGACCGAGAAAAGGCTTGAGGGTCCAGGAGGTGACGATAGTTGCAGAAATGAATGAGTTATGAACTTTGCAACAGCTATCTTAAACTTGCGCGGACAAACTACTCTCTACTTCTGGACTAACTAGAGCTCTCAAGTAAATTAGTTTTCGTAATGTATGTTCTGAAATTGCCTCAGGAAGAAATTCTGATCTTGTAATATGATTCTATCCATCACTTGTTGACAGACAAGACAATGAAAAAGTTTGATACTCTTCGAAAATGTATCTTAGCGCGAAGCATCCTTGTTCTACAAATGAATTAGATAGAATTGTGTGTTTATTGTGCCTATGCCTCTACA
TACATACAACACACTCTGTCTTCACAATTCTTTTGCTTCAATAAAAACCTTATCTTCAAAATTTTCTTCAACCCCTTCTCCAATGGCTTCTTCTTCTTCTTCCCTCCATTTCCTTTCACTTACACCACAAACACTCCCAAAACCCACTTCCCAAACAACTTCAATTTCCTTCTTTTCACTTCCTCCTTCCTCTTTAAACCTTTCTTTATCATCTTCTTCAACCCCAAGAAACTTCGAATCTTCTCGTTTTGTTCGTAAAGTAACCCTTTCTGATTTTGACCAAATTGAGGAAGTTGAGGCTGGTGATGATGATGAGGAGGAGGGGGGTTTGAGTGATGAAGGTGCTTCATATGAAGAACGTAATGCCAATCCTGACCTTAAAATCTTTGTTGGTAATTTGCCTTTCAGTGTTGACAGTGCGGCTCTTGCTGAGCTTTTTGAGCGTGCTGGAGATGTTGAAATGGTTGAGGTTATCTATGACAAGCTTACAGGAAGAAGCAGAGGTTTTGGCTTTGTGACAATGTCCTCCAAAGAGGCAGTTGAAGCCGCCTGTCAACAATTTAATGGCTATGAAATTGACGGGAGGGCACTGAGGGTGAATTCTGGGCCAGCACCACCCAAAAGGGAGAATTCTTTCGGGGACAATTCTTCTTACCAGGGAGGTAGGGGTGGAGGGAGTATGGACAGTTCCAACAGAGTCTACGTAGGAAACCTTGCATGGAGTGTTGACCAACAGCAACTTGAGACCTTGTTCAGTGAGCAAGGAAAGGTCGTGGATGCCAAAGTAGTCTATGATAGAGATAGCGGTAGATCAAGGGGCTTTGGATTTGTAACATACAGTTCCGCTAAGGAGGTCAACGATGCAATTGAAAGCTTGGATGGTGTTGACCTAGGTGGCAGGGCCATCCGTGTAAGTCCTGCTGAAGCTCGTCCACCCAGACGTCAATTCTGAAGATTGTAGCCAACATCTTTTTGACCGAGAAAAGGCTTGAGGGTCCAGGAGGTGACGATAGTTGCAGAAATGAATGAGTTATGAACTTTGCAACAGCTATCTTAAACTTGCGCGGACAAACTACTCTCTACTTCTGGACTAACTAGAGCTCTCAAGTAAATTAGTTTTCGTAATGTATGTTCTGAAATTGCCTCAGGAAGAAATTCTGATCTTGTAATATGATTCTATCCATCACTTGTTGACAGACAAGACAATGAAAAAGTTTGATACTCTTCGAAAATGTATCTTAGCGCGAAGCATCCTTGTTCTACAAATGAATTAGATAGAATTGTGTGTTTATTGTGCCTATGCCTCTACA
| Protein sequence
Protein sequence
| translated polypeptide sequence |
>PGSC0003DMT400055527 Single-stranded DNA binding protein
MASSSSSLHFLSLTPQTLPKPTSQTTSISFFSLPPSSLNLSLSSSSTPRNFESSRFVRKVTLSDFDQIEEVEAGDDDEEEGGLSDEGASYEERNANPDLKIFVGNLPFSVDSAALAELFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPAPPKRENSFGDNSSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIESLDGVDLGGRAIRVSPAEARPPRRQF*
MASSSSSLHFLSLTPQTLPKPTSQTTSISFFSLPPSSLNLSLSSSSTPRNFESSRFVRKVTLSDFDQIEEVEAGDDDEEEGGLSDEGASYEERNANPDLKIFVGNLPFSVDSAALAELFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPAPPKRENSFGDNSSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIESLDGVDLGGRAIRVSPAEARPPRRQF*
| Gene model matches
Gene model matches
|
| SGN Unigenes
SGN Unigenes
| [Associate new unigene] |
Unigene ID:
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| GenBank accessions
GenBank accessions
| [Associate new genbank sequence] |
AF389431 Solanum tuberosum single-stranded DNA binding protein precursor, mRNA, complete cds.
| Other genome matches | None |
| Literature annotations [1]
Literature annotations [1]
| [Associate publication] [Matching publications] |
Repression of the defense gene PR-10a by the single-stranded DNA binding protein SEBF.
The Plant cell (2001)
Show / hide abstract
Show / hide abstract
The potato pathogenesis-related gene PR-10a is transcriptionally activated in response to pathogen infection or elicitor treatment. Characterization of the cis-acting elements of the PR-10a promoter revealed the presence of a silencing element between residues -52 and -27 that contributes to transcriptional regulation. In this study, we have isolated a silencing element binding factor (SEBF) from potato tuber nuclei that binds to the coding strand of the silencing element in a sequence-specific manner. The consensus binding site of SEBF, PyTGTCNC, is present in a number of PR genes and shows striking similarity to the auxin response element. Mutational analysis of the PR-10a promoter revealed an inverse correlation between the in vitro binding of SEBF and the expression of PR-10a. SEBF was purified to homogeneity from potato tubers, and sequencing of the N terminus of the protein led to the isolation of a cDNA clone. Sequence analysis revealed that SEBF is homologous with chloroplast RNA binding proteins that possess consensus sequence-type RNA binding domains characteristic of heterogeneous nuclear ribonucleoproteins (hnRNPs). Overexpression of SEBF in protoplasts repressed the activity of a PR-10a reporter construct in a silencing element-dependent manner, confirming the role of SEBF as a transcriptional repressor.
Boyle, B. Brisson, N.
The Plant cell.
2001.
13(11).
2525-37.
| Ontology annotations (2)
Ontology annotations (2)
| [Add ontology annotations] |
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