EST details — SGN-T178686
Search information |
Request: TPTAV57TH | Match: SGN-T178686 |
Request From: web user | Match Type: Chromatogram internal Identifier |
Clone information |
SGN ID: SGN-C110864 | Clone name: cLPT-6-I18 |
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Library Name: cLPT | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E366831 | Length: 579 bp (877 bp untrimmed) |
Status: Chimera not assessed | Direction: 5' |
>SGN-E366831 [] (trimmed - flagged)
CCACCTTGGATGAATACCGTAAATATATTGAGAAAGATCCTGCCCTGGAGCGTCGTTTCCAGCAAGTTTATGTTGACCAGCCTACAGTTGAAGAC
ACTGTCTCCATACTTCGCGGATTACGTGAAAGATATGAGCTACATCACGGGGTTCGCATTTCAGACACTGCGCTTGTCGACGCAGCTATTCTTTC
GGACCGTTATATTAGTGGACGTTTTCTACCTGACAAAGCTATTGACCTAGTTGATGAAGCTGCTGCAAAACTGAAAATGGAGATCACCTCAAAAC
CTACAGCCCTTGACGAGATCAATCGTGCAGTTTTGAAGTTGGAGATGGAGAGGCTATCTCTAACTAATGATACAGATAGAGCATCGAAAGACCGG
GTAAACCGTCTTGAGACTGAGTTGTCTCTTTTGAAGGAGAGGCAAGCTGAGCTGAACTTAAGTACGGGAGTCTAAACACCTTGCAGCGTCAACTT
GAAGCTTCAGAAAAAGAACTGAGTGATTATATGAAGTCTGGAAAATCGATGCTCAGAGAAGAAGTAACTGGGAATGATATTGCAGAGATTGTCAG
TAAGTGGAC
ACTGTCTCCATACTTCGCGGATTACGTGAAAGATATGAGCTACATCACGGGGTTCGCATTTCAGACACTGCGCTTGTCGACGCAGCTATTCTTTC
GGACCGTTATATTAGTGGACGTTTTCTACCTGACAAAGCTATTGACCTAGTTGATGAAGCTGCTGCAAAACTGAAAATGGAGATCACCTCAAAAC
CTACAGCCCTTGACGAGATCAATCGTGCAGTTTTGAAGTTGGAGATGGAGAGGCTATCTCTAACTAATGATACAGATAGAGCATCGAAAGACCGG
GTAAACCGTCTTGAGACTGAGTTGTCTCTTTTGAAGGAGAGGCAAGCTGAGCTGAACTTAAGTACGGGAGTCTAAACACCTTGCAGCGTCAACTT
GAAGCTTCAGAAAAAGAACTGAGTGATTATATGAAGTCTGGAAAATCGATGCTCAGAGAAGAAGTAACTGGGAATGATATTGCAGAGATTGTCAG
TAAGTGGAC
Unigenes |
Current Unigene builds | |||||
No current unigene builds incorporate this sequence |
Chromatogram |
SGN-ID: SGN-T178686 [Download][View] | Facility Assigned ID: TPTAV57TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Problems: | E. Coli (cloning host) sequence detected |
Sequence Entropy: 0.978 | Expected Error Rate: 0.0062 | Quality Trim Threshold: 14.5 |