EST details — SGN-C102384
| Search information |
| Request: 102384 | Match: SGN-C102384 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C102384 | Clone name: cLHT-24-K8 |
| ||
| Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: Alias clone SGN-C184889 is on microarray TOM1: SGN-S1-1-2.4.14.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184889 [TUS-45-P7] | Trace: SGN-T1850 | EST: SGN-E378468 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C184889 [TUS-45-P7] | Trace: SGN-T198752 | EST: SGN-E397426 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184889 [TUS-45-P7] | Trace: SGN-T198753 | EST: SGN-E397427 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E358920 | Length: 458 bp (946 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E358920 [] (trimmed)
TGAAACTAACACAAAGCAGGAGCAGAAGCAGCAACAAACAGAGAGAGAAGAAAACAGAGGAAGATAAGAGGAAAATTTATCGAATCGAGAGAAAA
GGGGAAGTAAAGTTGCGAAGAGTGAGAATTTCAAAGGAAATGAACAAAGGAGCAAACGGAAATCAGCAATTGGAGTTACCGGCGGGATTCAGATT
CCATCCGACAGACGACGAATTGGTGCAGCACTATCTCTGCAGGAAATGCGCCGGACAGTCGATTGCAGTATCAATTATAGCTGAAATTGATCTTT
ACAAGTTTGATCCATGGCAGTTGCCTGAGAAGGCTTTGTACGGTGAAAAAGAGTGGTATTTTTTCTCACCAAGGGATAGAAAATATCCGAACGGT
TCACGGCCGAACCGAGCAGCAGGAACCGGTTATTGGAAGGCAACCGGAGCTGATAAACCGGTGGGAAAACCCAAAACG
GGGGAAGTAAAGTTGCGAAGAGTGAGAATTTCAAAGGAAATGAACAAAGGAGCAAACGGAAATCAGCAATTGGAGTTACCGGCGGGATTCAGATT
CCATCCGACAGACGACGAATTGGTGCAGCACTATCTCTGCAGGAAATGCGCCGGACAGTCGATTGCAGTATCAATTATAGCTGAAATTGATCTTT
ACAAGTTTGATCCATGGCAGTTGCCTGAGAAGGCTTTGTACGGTGAAAAAGAGTGGTATTTTTTCTCACCAAGGGATAGAAAATATCCGAACGGT
TCACGGCCGAACCGAGCAGCAGGAACCGGTTATTGGAAGGCAACCGGAGCTGATAAACCGGTGGGAAAACCCAAAACG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E358920] | SGN-U583008 | Tomato 200607 | Build 2 | 32 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T170480 [Download][View] | Facility Assigned ID: THTDP64TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0135 | Quality Trim Threshold: 14.5 |
Working
