EST details — SGN-C10802

Search information 
Request: 10802Match: SGN-C10802
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C10802Clone name: cLEC-6-F11
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C184913 is on microarray TOM1: SGN-S1-1-2.1.12.13
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184913 [TUS-46-A7] Trace: SGN-T198877 EST: SGN-E397551 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E202329Length: 494 bp (613 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E202329 [] (trimmed) CGGGTAGGCTCCCAATCTGATTTTCTCATCGGTGGCAACTTGCATCCATCTGTACAGTGGGCTGAGGAGGAATCTGAAGTTGATCCTAATGAACT
TGCTCAGATCAAAGTAGCCTTTGTCAGAAATGTACCTCCTGGCGCTGATGAAGATTACTTGAAGAAGCTCTTTCAGCCCTTTGGCAATGTAGAGA
AGGTTACTCTCTCCAGGAAGGGTAGTTCCACCATTGGATTTGTTTACTTCGATAAGCGATCTGATCTTGACAATGCTATTAAAGGATTGAATGAG
AAAACTGTACAAGGGCCAAGGGGAGGTCCCTCAAGCAAGATTCAGGTCGAAGTTGCGAGGCCAACTGATAAGAACAGGAAACGAGGTCGTGAGGA
TCAAAAAATGTCCAGTAACATTGAGAGTCATTCCAAGCTTTTGAAGGATGATCCAAATGTTGAGATGGTTGGGGGTCCTAAATCAAAAGCTCAAC
CGGTGATGCATCTATCAGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E202329] SGN-U574382 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T23990 [Download][View] Facility Assigned ID: TCAAW30TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0070 Quality Trim Threshold: 14.5