EST details — SGN-C10807

Search information 
Request: 10807Match: SGN-C10807
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C10807Clone name: cLEC-6-F16
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C172689 is on microarray TOM1: SGN-S1-1-2.3.20.9
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C172689 [TUS-14-C23] Trace: SGN-T195299 EST: SGN-E393973 Direction: 5' Facility: INRA
Clone: SGN-C172689 [TUS-14-C23] Trace: SGN-T195562 EST: SGN-E394236 Direction: 5' Facility: INRA
Clone: SGN-C172689 [TUS-14-C23] Trace: SGN-T195562 EST: SGN-E398915 Direction: 5' Facility: INRA
Clone: SGN-C172689 [TUS-14-C23] Trace: SGN-T195741 EST: SGN-E394415 Direction: 3' Facility: INRA
Clone: SGN-C172689 [TUS-14-C23] Trace: SGN-T195741 EST: SGN-E399518 Direction: 3' Facility: INRA
Clone: SGN-C172689 [TUS-14-C23] Trace: SGN-T199433 EST: SGN-E398107 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E202553Length: 523 bp (801 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E202553 [] (trimmed) GCTAATTCAACTTTTCTATATCATCTTCATCACTAATCTCATCGGTAAATTAATATTTAGCAGCATGCCGTCAGTCTCCGGTCGGGTCGTCTGTG
TTACCGGTGCCGGAGGCTTCATCGCCTCTTGGCTCGTTAAACTTCTTTTGGAAAAAGGCTACACTGTTAGGGGAACTGTAAGAAATCCTGATGAT
CCAAAGAATTGTCATTTGAGAGAACTTGAAGGAGCAAAAGAGAGGCTAACACTATGCAGAGGTGATCTTCTTGATTATCAGAGTTTGCGTGAAGC
AATCAATGGCTGTGACGGAGTTTTCCACACAGCTTCACCAGTTACTGATGATCCAGAACAAATGGTGGAGCCAGCAGTAATTGGTACTAAGAATG
TGATAACAGCAGCAGCAGAGGCCAATGTAAGACGCGTTGTGTTTACTTCCTCAATTGGAGCTGTGTACATGGACCCAAGCAGAGACCCTGAAAAA
GTGGTTGACGAGACTTGCTGGAGCGATCCTGATTTTTGCAAGAACACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E202553] SGN-U570355 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T24214 [Download][View] Facility Assigned ID: TCAAX32TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.985 Expected Error Rate: 0.0104 Quality Trim Threshold: 14.5