EST details — SGN-C110306

Search information 
Request: 110306Match: SGN-C110306
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C110306Clone name: cLPT-4-E6
cartOrder Clone
Library Name: cLPTOrganism: Solanum pennellii (formerly Lycopersicon pennellii)

Tissue: leaf trichomes
Development Stage: 4-8 weeks old

Microarray: Alias clone SGN-C183438 is on microarray TOM1: SGN-S1-1-5.3.1.6
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183438 [TUS-42-C20] Trace: SGN-T1760 EST: SGN-E378617 Direction: 5' Facility: Giov. Lab
Clone: SGN-C183438 [TUS-42-C20] Trace: SGN-T195016 EST: SGN-E393690 Direction: 5' Facility: INRA
Clone: SGN-C183438 [TUS-42-C20] Trace: SGN-T196011 EST: SGN-E394685 Direction: 3' Facility: INRA
Clone: SGN-C183438 [TUS-42-C20] Trace: SGN-T199653 EST: SGN-E398327 Direction: 5' Facility: INRA
Clone: SGN-C183438 [TUS-42-C20] Trace: SGN-T199653 EST: SGN-E399234 Direction: 5' Facility: INRA
Clone: SGN-C183438 [TUS-42-C20] Trace: SGN-T200280 EST: SGN-E399233 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E364817Length: 587 bp (932 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E364817 [] (trimmed) TTTTAAAAAAAAACACATAATCTATTTGTTGTGTCAAGCCAAGGCAATAAAGTTTCTAATGTTTCAAGTAAATGAAGGGTTGTGTCAAATATCAG
ATCTTATACAAAGTTCCATGGAATATGAACACTTCTGGTAGTGGAAAAATCAACTCCTTTCTACAAATTTGTTGAATGCCTCGAGCAATGTCGCG
TTACATACACCTTCTTCAAGTGATATATTGTGTTATCCACCAAGAAATCCAAAGACGAGAACTATATACAACGCCTCGTGCATTTGGGTGAATTT
TTTTCATATGGTTGCTGCATATTTTCCTCCTACATTCACTAAGATTCAAGTACAACTCCATGTTCTAAGAGCTCAGATAAAACACTTCTCATTTT
ATCCACTGACACAGGTTTTAGGATAACTCCATCCATACCAACTCTCATGCAGTTTTCTTTCGTAACTCTGTCTGTGTATCCCGTCAATGCCACAA
TAAGTGGCCTACCGTGACGTTTCCCAAACCTTTCATGTATCACTACAGCAACTTCGTAACAGTCTATACCTTGCATGCTGACATCCATGATAACT
ACCTTGTGTTCATGTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E364817] SGN-U578092 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T178218 [Download][View] Facility Assigned ID: TPTAN27TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0039 Quality Trim Threshold: 14.5