| SGN ID: SGN-C147345 | Clone name: cTOF-4-I16 |  | Order Clone |
|
| Library Name: cTOF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants
Microarray: Alias clone
SGN-C181677 is on microarray TOM1: SGN-S1-1-6.2.12.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Sequence Id: SGN-E339413 | Length: 663 bp (833 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E339413 [] (trimmed)
GGTTTAGCTTCGCAGCTCCTCAACCCTCCGGCTGCAGCAGGCGAGACAACTTCGTTCAGTCATCATGGGGAAGACACGTGGAATGGGAGCTGATC
GTAAACTGAAGTCCCACTGTTGGAGGCAGAGGTGGGCGGACAAGTCTTACAAGAAGTCTCATATTGGTAATGTATGGAAAAAGCCATTTTCAGGA
TCATCTCACGCCAAGGGGATTGTTCTTGAGAAACTTGATATTGAAGCTAAGCAACCTAACTCTGCCATTTGAAAGTGTGCTCGAGTTCAGTTGAT
AAAGAATGAGAAGAAGATTGCTGCTTTGTACCCAATGATGGTTGTTTGAACTACATTGAAGAGAATGATGAGGTGTTAAATGCTAGATTTGGTCG
CAAAAGGCCATGCTGTGGAAGATATTCCTGGTGTTGGGTTCAAGGTTGTGAAGATGTTTGGTGTGTCACTTTTGGCTCTCTTCCAAGAGAAGAAA
GAGAAGTCCAGATCTTAAATATCACTTTCTGGTCAAATGCAAGTGTGTTCGGAATTAATTTTTGTTAGGATACAAAATATCATTTTTTTTTCTTT
TTCCCTAATTTCCAACTAGTATACTTTGTCCATGAATATATCCAGGACATTTGTTTCACCTTCTGAAATAAATGTTAAGTGGAATTTTGGATG
[BLAST] [AA Translate]
| SGN-ID: SGN-T153672 [Download][View] |
Facility Assigned ID: TOFAN56TH
|
| Submitter: Koni |
Sequencing Facility: TIGR |
Funding Organization: National Science Foundation
| Processed By: SGN |
Basecalling Software: phred |
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
| Sequence Entropy: 0.972 |
Expected Error Rate: 0.0021 |
Quality Trim Threshold: 12.5 |
