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EST details — SGN-C15359

Search information 
Request: 15359Match: SGN-C15359
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C15359Clone name: cLED-11-L15
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C183049 is on microarray TOM1: SGN-S1-1-2.3.3.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183049 [TUS-41-C15] Trace: SGN-T191471 EST: SGN-E390145 Direction: 5' Facility: INRA
Clone: SGN-C183049 [TUS-41-C15] Trace: SGN-T191689 EST: SGN-E390363 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E235534Length: 595 bp (756 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E235534 [] (trimmed) CAGCGGAACTCTTCTTTCTGCTGGTGGCTTTTTGTACTTCATGCTAAGTGGAAGCACTGCTGCCCTTAGATTTGGTGTTGTACTTGGAGGTGCTC
TTTTGGCCTTAAGCGTCTCAAGTTTACGATCATGGAGAAGTGGAGATTCGACTTTACTAGCTTTAAAGGGACAGGCAGCCATTGCTACCATCTTA
TTTGTCAGAGAATTTCGCTTGATGTTGCAGAAACCATTTATTTTCAATTTTATTACAGCCACCATCAGTGGAGGGGTGGCAGCATTCTATGCTTA
TAGGATCTTAATGGATGGTGAGCAGACAAAGGGTTCAAACTCGGCAGCACAGACAGATAGTTAAAGCTAATTCTAGGCAAGAAACTCATGTTGGA
GGGAATTCAAGTTCCACATCAATCAATCTCAATCTGGTAGATAATTGCCCAATGCAAGAACTGAGCAGCAGGGATTCTGCAACATTTTAAGACAG
ACGACTATTAGAGGAAGATTTGCTTCTTTGAGTACGTTGGTTAATGTATTGTATCTTCGTTTTAAGATATGATGATGGCATTTCTGCATCAGTTA
TCATTTCGGGGAAACAACTGTCTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E235534] SGN-U589587 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T51544 [Download][View] Facility Assigned ID: TOVBQ68TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0026 Quality Trim Threshold: 14.5