Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-C15490

Search information 
Request: 15490Match: SGN-C15490
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C15490Clone name: cLED-13-B16
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175561 is on microarray TOM1: SGN-S1-1-2.3.13.16
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175561 [TUS-21-K15] Trace: SGN-T190350 EST: SGN-E377159 Direction: 3' Facility: INRA
Clone: SGN-C175561 [TUS-21-K15] Trace: SGN-T190351 EST: SGN-E377160 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E236469Length: 355 bp (863 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E236469 [] (trimmed) GAAAACTGTCAAGGAGTCAAATTACGGTCTTGGAAGAAGCAGTAGATATCTACACATCCGAGTTTCAAAGATTCATCACATTCATTCGAGACGTA
TTTGCAAATTCCCCTTTCTTTATTACTGCAGAAGAAGCTGGTACATTAGAAGCCAGAAAAAGTGATGAGTACAAGGAAGTGAGTGTTCCAGCAGG
AAAAAGTCATGAGGTATCATTGACAGTCGATGCCATAAATTCATACATTGCGTGGGATTTCTCTTTGGTTCAAGGCAGAGTAGATATGGACATAG
GCTNTAGCATGGAGTATACGGATCCTTCTGGACAGAAGACGCAAATCTTACCTTATCGACGATATGGAGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E236469] SGN-U564597 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T51747 [Download][View] Facility Assigned ID: TOVBZ08TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0163 Quality Trim Threshold: 14.5