EST details — SGN-C15542

Search information 
Request: 15542Match: SGN-C15542
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C15542Clone name: cLED-13-D5
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175588 is on microarray TOM1: SGN-S1-1-7.4.13.20
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175588 [TUS-21-L18] Trace: SGN-T190744 EST: SGN-E378130 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E236423Length: 491 bp (985 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E236423 [] (trimmed) CAGGAAGGGCCCAAATCTGCTTCAATCTCTTTTGCACTCGTTGCGCGATAAACCCTAGTAACGCCACCACCTACCGTCTTGGCCTTCTTCCCTAC
GAGCAACAATGGCTTCCAGTGATCATACCATACTGCAATTTTCACCATCTTCAACCGGCATATCCGCAAAGGTTCACCCTTTAGTCATATTCAAC
ATATGTGACTGCTTTGTCAGACGTCCCGATCAAGCCGACCGAATCATTGGCACTCTTCTTGGATCAGTATTACCTGACGGTACTGTAGACATTCG
CAATTCCTATGCTGTTCCACATAGCGAGTCACAAGATCAGGTTGCCTTGGATATTGATTATCATCACAATATGTTATCATCTCATCAGAAGGTGA
ATCCAAAGGAAGTCATTGTTGGATGGTTTTCTACTGGTTTCGGAGTCACAGGTGGTAGTGCTTTGATTCATGAGTTTTTTTCTAGAGAAACTACA
AATCCGATACATTTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E236423] SGN-U571167 Tomato 200607 Build 2 23 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T51701 [Download][View] Facility Assigned ID: TOVBY15TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0130 Quality Trim Threshold: 14.5