EST details — SGN-C15778

Search information 
Request: 15778Match: SGN-C15778
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C15778Clone name: cLED-13-O23
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175696 is on microarray TOM1: SGN-S1-1-3.1.11.4
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175696 [TUS-22-A6] Trace: SGN-T180536 EST: SGN-E368057 Direction: 3' Facility: INRA
Clone: SGN-C175696 [TUS-22-A6] Trace: SGN-T180537 EST: SGN-E368058 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E236541Length: 323 bp (793 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E236541 [] (trimmed) CAGCTATCTTGCTCCTAGTTCACATTCAAAGTACCCAGGAAACCCACAGGAGTTTCATATATTCCCTAATAGCACTTTTCATATCCCCGTTAATG
ATGTACACCAGATATGGAACACTGGTGAACATGAAGATTTACAAGCTTTAGTTGTTATATCTCGTCCTCCAGTGAAAGTGTTTATGTACGATGAC
TGGTCGATGCCACACACAGCTGCCAAATTGAAGTTCCCGTATTACTGGGATGAGAAATGTTATCAGACAACAACGAGGAAAGACGAGCTTTAGCC
AGAAAAGTAGGCTATGCAGTTACTTACATTTAGCTAGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E236541] SGN-U563584 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T51819 [Download][View] Facility Assigned ID: TOVBW96TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0069 Quality Trim Threshold: 14.5