EST details — SGN-C164214
| Search information |
| Request: 164214 | Match: SGN-C164214 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C164214 | Clone name: cTOS-23-C18 |
| ||
| Library Name: cTOS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: suspension cultures
Development Stage:
Microarray: Alias clone SGN-C186337 is on microarray TOM1: SGN-S1-1-2.4.5.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E357487 | Length: 773 bp (944 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E357487 [] (trimmed)
CTTGGCATAAGGTTTTCCACAAACGGATGCCTCCTGAAGCAATTGACCTTGCTTCTCGGCTACTGCAGTACTCACCAAGTCTACGTTGCACTGCA
CTTGAAGCATGTGCTCATCCTTTCTTTGATGAACTTCGTGAACCAAATGCACGGCTTCCCAATGGTCGCCCATTGCCCCCTCTCTTCAATTTTAA
GCAGGAGTTATCTGGTGCCTCTCCGGACCTCGTAAACAGGTTGATACCAGACCATATAAAAAGACAGATGGGCCTGCATCTTTTTGCATCCCACG
GCGACATGACGTGAAGTATATGTTTAGTGAAGTATACTAGTTTATGATCTATATATGAAGGGATCCAAGTGACACCCCTTCCAGAGCAGAGGAGT
CCAGCATGACAGCGACAGTATATCCTGGTCGAAAAGGACAATGTAATGGGGCTGCAGTGCATTTTAGTTCTGTACTTTGTATTATCTTTTTTGTT
CCACTCTTCAAAGTCTTCCCATCTTAGTAGCCAACTAGTGAAAAGGAAATATGTTTTTGTACATGTTTGTTAGTAGTAAATTGACCAGAAAGCTT
CCGGGGACACGTTTGAATATGTATGGACAAGTTGCAAGGCTCCAAAAGGATTGCCAGGACTTGAAAGGGCAGTATTTTTTTTTCCCGTAAGTTTA
TATCTCACTTCAGTTTGTATTTAGCAGTCTACTTTGAAAAGAGTTGCGAGCAAATTTGTGTTACAGTTGCTCTATGTGATTATGATNCATCAAAC
GTATCTATTTTGT
CTTGAAGCATGTGCTCATCCTTTCTTTGATGAACTTCGTGAACCAAATGCACGGCTTCCCAATGGTCGCCCATTGCCCCCTCTCTTCAATTTTAA
GCAGGAGTTATCTGGTGCCTCTCCGGACCTCGTAAACAGGTTGATACCAGACCATATAAAAAGACAGATGGGCCTGCATCTTTTTGCATCCCACG
GCGACATGACGTGAAGTATATGTTTAGTGAAGTATACTAGTTTATGATCTATATATGAAGGGATCCAAGTGACACCCCTTCCAGAGCAGAGGAGT
CCAGCATGACAGCGACAGTATATCCTGGTCGAAAAGGACAATGTAATGGGGCTGCAGTGCATTTTAGTTCTGTACTTTGTATTATCTTTTTTGTT
CCACTCTTCAAAGTCTTCCCATCTTAGTAGCCAACTAGTGAAAAGGAAATATGTTTTTGTACATGTTTGTTAGTAGTAAATTGACCAGAAAGCTT
CCGGGGACACGTTTGAATATGTATGGACAAGTTGCAAGGCTCCAAAAGGATTGCCAGGACTTGAAAGGGCAGTATTTTTTTTTCCCGTAAGTTTA
TATCTCACTTCAGTTTGTATTTAGCAGTCTACTTTGAAAAGAGTTGCGAGCAAATTTGTGTTACAGTTGCTCTATGTGATTATGATNCATCAAAC
GTATCTATTTTGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E357487] | SGN-U578819 | Tomato 200607 | Build 2 | 53 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T169048 [Download][View] | Facility Assigned ID: TSCDL21TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.985 | Expected Error Rate: 0.0066 | Quality Trim Threshold: 12.5 |
Working
