EST details — SGN-C17129

Search information 
Request: 17129Match: SGN-C17129
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C17129Clone name: cLED-18-L3
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C185897 is on microarray TOM1: SGN-S1-1-2.2.7.6
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185897 [TUS-48-J7] Trace: SGN-T1912 EST: SGN-E378819 Direction: 5' Facility: Giov. Lab
Clone: SGN-C185897 [TUS-48-J7] Trace: SGN-T192549 EST: SGN-E391223 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E237991Length: 406 bp (897 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E237991 [] (trimmed) CAGGTTTCTGTATCTATCCATTGTTAAACTAAAATATCATTCTTTTTTTCCCAATTTCCGAGTTTAAAAACGGGTTTATCTGAGTTAAAATAAAA
TGAACAATAGAAATTTGTGTAGCTGTAAATCTTTTAATTTAAAATAAAATTAATATTTTAAAGTTAAATTGTTAGCGAGTAAAGAAATAAAAAAC
AGAGTTGTATGATTGTTGGTTCTGTTTTTCCTTTTTCTTTTCAAAATATGTTAATTTTACCTTTTATTATATACTTTTGGGATAATTTATATCAT
TGTCGTTAGTGTTTACGTTATTTTATTTAAATTTTGAATTTGTCTCTAATAATATAGGCGTGGATACGCGGTCACGGCTGCACAGGGTGGTGTTT
CTGGTAGTGTAAGAGGTAGTGGGAGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E237991] SGN-U578369 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T53294 [Download][View] Facility Assigned ID: TOVCS62TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.897 Expected Error Rate: 0.0128 Quality Trim Threshold: 14.5