EST details — SGN-C17224

Search information 
Request: 17224Match: SGN-C17224
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C17224Clone name: cLED-19-A22
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C181195 is on microarray TOM1: SGN-S1-1-8.2.15.21
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C181195 [TUS-36-F9] Trace: SGN-T1669 EST: SGN-E378203 Direction: 5' Facility: Giov. Lab
Clone: SGN-C181195 [TUS-36-F9] Trace: SGN-T193981 EST: SGN-E392655 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E237480Length: 448 bp (746 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E237480 [] (trimmed) CAGAATATATCGATCCAGCATTTACTTATGCCAACTTCACGGTGGAAGAGCAGGCCAAGGTAATCGTTGCAGCTCGCAGTAACAATGAGATGGAT
GCATCAAAGTTGAAGAAAGAGTTCCCCGAGTTGCTATCAATTAAAGAGTCGCTGATCAAGTACGTTTTTGAACCAAACAAGAAAACCTCTGCATA
AAAAGGCCGTGTTCTCAGGAATTGTGTATGCTATTTTAGCTATTATTTCATTATTAGTTCCTCGAATTCGCTAGATATTCATTAGTGATTTAGCT
GTTGTTCCTTGTTATTTTTGTATGAATTCATAATCTGTGCCTTCTTTGGGGAAGATTTGGAATATTGGATAGGCTGTGTTCCCTGTATCTGTTGT
TAAATGAGTTTGTGTTAAAGATCTTGTGTACTTTGTTGACTTTGATATATGGATGTATGAACTTTTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E237480] SGN-U565144 Tomato 200607 Build 2 48 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T53394 [Download][View] Facility Assigned ID: TOVCV11TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0123 Quality Trim Threshold: 14.5