EST details — SGN-C173015

Search information 
Request: 173015Match: SGN-C173015
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C173015Clone name: TUS-15-A13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173015 is on microarray TOM1 spot ID 1-1-4.1.20.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1175 [cLEC-11-C8] Trace: SGN-T25684 EST: SGN-E201737 Direction: 5' Facility: TIGR
Clone: SGN-C173015 [TUS-15-A13] Trace: SGN-T188546 EST: SGN-E374902 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E374903Length: 698 bp (879 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374903 [] (trimmed) TTTTGTTTGCACAATTTGCATTTTTACATTTTATTTCATATCATATCACAAATGGATAATCAATTGATTTCGAGAAAACGCGTATATGACGACTC
AATAGAATTACAGATCAATTCCCCGGAGGTAAAAAGACTCCGGGAAGATCTCTTAGACGATTTATACGATTCGGAGTTTTGCACTCCGAATCACG
ATCTAGATTCCTTCATGAAGAGCTTCGAAAATGAAATTACAGCTTCAGAGACCGCCGGAGTTTCGTCGGAATCCGGCGAATCTCAGCCGGAGTTA
GGATATCTTCTAGAAGCTTCTGATGATGAACTCGGACTACCTCCGCCTATCGAGGCGGAGCCTGAGTCAGTCCGAGTTTGTACTGATTCACTCAG
TAACGAGTTTTGGGGATTGGAGGACCAGATACCAAGTTATGACCCGTTTGATTTGGGTATTGTTGAATCGGATCATTTTAGCGGTAATAATATCA
ATATGGGTGAATATGTCGGGTTAGATGGTTTATTCGATCATTCGGATATCGGGTATGGGTCGGGTGATTTTCTATGGAGACCAGAAACTTTACCC
GCTCAATAATTTAGTTTAGGGAAAGATATTGTAAAGATTTTTATAATTTTTGTTTTTTTTAATATACTATTATTTGATTGAAAAACAAAAAGGTA
GAACAAATTATATATTTTCATTCCTTTGAAAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374903] SGN-U583935 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188547 [Download][View] Facility Assigned ID: FA0AAD3AA07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0091 Quality Trim Threshold: 14.5