EST details — SGN-C173099

Search information 
Request: 173099Match: SGN-C173099
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C173099Clone name: TUS-15-E1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173099 is on microarray TOM1 spot ID 1-1-8.1.20.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1581 [cLEC-13-E1] Trace: SGN-T25898 EST: SGN-E204145 Direction: 5' Facility: TIGR
Clone: SGN-C173099 [TUS-15-E1] Trace: SGN-T188561 EST: SGN-E374917 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E374918Length: 686 bp (872 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374918 [] (trimmed) ATAATATTTACCTACGATAAATATGTCGATGGATTTAATATTATCATCGAAAAAGGCCGATAAAACGATAGTGGAAGTTGAAGGAGTTGGTGGAT
ACTACACATGGTCAAGTAGCCAATTTCCCACTCTAAGTCAGAAAAAAGTTGCAGCTGGATTATTAATTCTTCAGCCTCGTGGCTTAGCTTTACCT
CACTATGCTGATTCCTCTAAAATTGCTTATGTTTGTGAAGGCAAGTATATGGAGAATTATCAGGTGGGAAAAACTCAATTTGGGAAGCAGCGTCT
CCATCAATTTTAGAGGCCTCTCTAAATACGACTCCAGATTTGACAAAGTCTTTCAAGTCCAAGATTGCTAAGGGTTCAGTGATTGCCCCACCTTC
CAATGGTTAAGTAATTAATTACTTGTTTGAAATAAGATTGATCGATGATCAATAGGATTATATGGGAGCTTTTGACGTTAAGCCTATATGCTGTT
GTGTTTCAATTATATATGTATGCTTTTGTAATTAAGAATAAAAGAAAATGAATTTGGTCTGTGAACGGAGGCAGTATAAAGGCATATTGTACCTA
AGAAAGCCACCTTGTTCTCAGGTACGTCCAAACTCCCTTCGTCAAAATATTAGTATTATCTATATATGGTTAAAATAATTTTTTAGATATATAGT
AGATGTTGAACCTTCTCTGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374918] SGN-U584925 Tomato 200607 Build 2 34 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188562 [Download][View] Facility Assigned ID: FA0AAD3AC01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0069 Quality Trim Threshold: 12.5