EST details — SGN-C173269

Search information 
Request: 173269Match: SGN-C173269
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C173269Clone name: TUS-15-L3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173269 is on microarray TOM1 spot ID 1-1-6.4.20.15 [Order] [Tomato Microarray Database]
See unigene SGN-U575556 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C1955 [cLEC-14-G18] Trace: SGN-T26431 EST: SGN-E204815 Direction: 5' Facility: TIGR
Clone: SGN-C173269 [TUS-15-L3] Trace: SGN-T188881 EST: SGN-E374651 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E374652Length: 696 bp (917 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374652 [] (trimmed) AAAATATCCAGTAAATATGTTTTGCTCAACTTGTCCAGAAATAAAATGTTAGTTCCTCTCGTGCGATGAACATAGGTTGCAACAATAAAAGCATA
CAAAAAATTCAATGGAGATAACAGGAAAGACATAATTATCCTCCTTTTCTACTGAACACCGAAAAGTAACAAAACTTGCAAAACCTGATCCTATC
AAAATCTAAATCCTGATGTTGAAGTAATCCTGGTCAAAATGATGCAATCTCACATATCCATCTTCACCACCACTTGCAAAACTTTTCCCATCAGG
ATTGAAAGCCAAAGCATTTATTGGTCCAAAATGCCCTTTGACACCTCCTATTTCTTCAGTAAGAATCTTGTCATAGAACTTGGCCTCAAACTTTC
CAGCACGATGGTCAGTAGTGGTGACAGCTGAAGCGTCTTGACCACCTCCCAGAACCACATGATTAAGAAGCGGCGACATTGTGACAGCATTCACG
GGTCGTTCGGTCGTATAGTTCTTGATAAGTGTCAAACTTCTGATGTCCCAGAGCTTTGCAGATTTATCAAGAGAACCAGTAATGAAGTGCGAACC
ATCCACTGATTTTTGTAGCGATGTAATACCCTTTTTATGACCGATTTCTTTGTCAGACTCCTTCAGTACCTTTCCAGTCTCAGCATCCCAGATAC
GTATTACAGCATCTTCACCAGCACTTATAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374652] SGN-U575556 Tomato 200607 Build 2 26 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188882 [Download][View] Facility Assigned ID: FA0AAD3CF02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0035 Quality Trim Threshold: 14.5