EST details — SGN-C173634

Search information 
Request: 173634Match: SGN-C173634
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C173634Clone name: TUS-16-K8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173634 is on microarray TOM1 spot ID 1-1-1.3.18.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C4040 [cLEC-23-F8] Trace: SGN-T28487 EST: SGN-E206528 Direction: 5' Facility: TIGR
Clone: SGN-C173634 [TUS-16-K8] Trace: SGN-T196764 EST: SGN-E395438 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E395439Length: 660 bp (863 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395439 [] (trimmed) TTTTGATGGTTTGACAGCACTGGAGTTAACCGGGACGGATCGAATCGGTTTATTATCGGAGGTTTTTGCAGTACTCTCAGAATTAGAGTGCAATG
TAGTTGAAGCTAAGGTGTGGACTCATAATGGTCGAATTGCATCCCTTATTTATGTTAAGGAACGTGATTCAGGGTCTCCGATTGAGGACTCTGAG
AAGATTGACACGATTGAAGCTCGTTTAAGGAACGTGCTCAAGGGGGATAATGATATTCGTAGTGCTAAAACATCGGTGTCTATGGCTGTTACCCA
TACAGAAAGAAGGCTTCATCAGATGATGTTTACTGATCGCGATTATGAAAGGAAGCCGATTATTAAGACTAATGATAACCCTATTGTATCGGTTT
TGAATTGCTTGGAGAAGGGTTATTCTGTTATAAATATTCACTGTAAGGATCGACCTAAGCTTCTGTTTGACATTGTTTGCACCATGACGGATATG
CAGTATGTTGTGTTCCATGCTACGCTTAATACAGCAGGGGACAGAGTACACTCGGAATTCTTCATTAGGCATACCGATGGAAGCCCAATTAGTTC
AGAAGCAGAGAAACAGCGAGTGATTCTATGTTTACAAGCAGCAATTGAGCGAAGAGCATCTGAGGGAGTGAGGCTGGAGTTATGCACGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395439] SGN-U570745 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196765 [Download][View] Facility Assigned ID: FA0AAD4BF04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0020 Quality Trim Threshold: 14.5