EST details — SGN-C173860

Search information 
Request: 173860Match: SGN-C173860
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C173860Clone name: TUS-17-D18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173860 is on microarray TOM1 spot ID 1-1-7.4.17.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C5724 [cLEC-32-M6] Trace: SGN-T29988 EST: SGN-E207775 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E395743Length: 415 bp (856 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E395743 [] (trimmed) GTCATTCCGATTGACCTTGTTGGAGTGAAAAGCTGCTGCTCACGCACACGCACATATCCGCAACATGTCTGCTGCTCTGGCTCGTCTCATCCGGC
TCCCAAACCTGCTGCAGGCGCCTGTGAGGAGAGGGATTGCCACAAAGCCCGCCAAGAGCCCAGTGTCTGCCGGGGAAGCCGTGATTGGGTTGTCC
ACCTTCTTGGTCTGCGCTCTGGTACCAGCTGGATGGGTTCTTTCCAATATGGAGGCATATAAGAAGAGAGACTAAAAATGAAAGAAGTCATCTGC
CTCTGCAACATTCCTCCTTCTCCATAAGACTGACACATGGCACTGTGCTGGTCCATAAAGGAAATGCTTGCCCCTGTTGCGTTAGATTTCTCCAG
CAGCCTGTTACATTAAACTGTTTACTTCCAATGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395743] SGN-U599661 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197069 [Download][View] Facility Assigned ID: FA0AAD5DB09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.986 Expected Error Rate: 0.0073 Quality Trim Threshold: 20.5