EST details — SGN-C173923

Search information 
Request: 173923Match: SGN-C173923
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C173923Clone name: TUS-17-G9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173923 is on microarray TOM1 spot ID 1-1-8.3.17.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C6399 [cLEC-35-E8] Trace: SGN-T30808 EST: SGN-E210460 Direction: 5' Facility: TIGR
Clone: SGN-C173923 [TUS-17-G9] Trace: SGN-T191641 EST: SGN-E390315 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E390104Length: 433 bp (914 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390104 [] (trimmed) CACAAATCGATAACCATGTCTACAATTACGTCAAATACTGCCGACCCACTTTCCCTGACCTTGTTTCCTGCAAACCCTTTTCAGAAAAAAGCTCG
AAAATCGAGGAATTGGGAGATGAGTTATGGCTGAAAATGAAAGAGGAAGCTAGGTCAGATATTGACCAAGAACCAATTTTGTCTAGTTATTACGT
TTCTTCAATTCTAGCTCATGAATCCATGGAGAGAGCTTTAGCTAATCATCTTTCTATGAAATTGGGTAATCCTAATCTTCCTAGTACTACTTTGT
TTGATTTATTTATTGGGGTGTTAACAGAAGAAACAGATATAATTAAATCTGTTAAAGCTGATTTAAGAGCTGTTAAAGAAAGGGACCCTGCTTGT
ATTAGTTACGTACACTGTTTCTTGAATTTTAAAGGGTTTGGGGGGGGGGGGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390104] SGN-U582407 Tomato 200607 Build 2 39 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191430 [Download][View] Facility Assigned ID: FA0AAD5AD05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0021 Quality Trim Threshold: 14.5