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EST details — SGN-C175102

Search information 
Request: 175102Match: SGN-C175102
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C175102Clone name: TUS-20-H12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175102 is on microarray TOM1 spot ID 1-1-5.4.13.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23953 [cLED-6-M23] Trace: SGN-T50034 EST: SGN-E233048 Direction: 5' Facility: TIGR
Clone: SGN-C175102 [TUS-20-H12] Trace: SGN-T190196 EST: SGN-E377974 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377975Length: 750 bp (954 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377975 [] (trimmed) CTGAATTCTCCACAGCAAAAACTGGAGTGAAATCAGAAGTGGCTCCAATTCAAAGCTTTTCACATGAGAACATGTCGAATAATCCTGCTCCGGTG
CATTACTGTCAACCATCGCAATATGTTAGAGAACAGAAGGCGGAAGATGGATATAATTGGAGGAAATATGGACAAAAGCAAGTGAAAGGAAGTGA
AAATCCGCGAAGTTATTACAAGTGTACATTTCCAAATTGTCCTACAAAGAAGAAGGTTGAAAGGAACTTGGATGGACACATTACTGAGATAGTTT
ATAAAGGGAGTCATAATCATCCCAAACCTCAATCCACTAGAAGATCATCTTCACAATCGATTCAAAACCTTGCTTACTCCAACTTGGATGTAACA
AACCAGCCAAACGCGTTTCTTGAAAATGGTCAAAGAGACTCCTTTGCTGTTACAGACAATTCTTCAGCTTCTTTTGGAGATGACGATGTTGATCA
AGGCTCTCCTATCAGTAAATCAGGAGAAAATGATGAAAATGAACCCGAGGCAAAGAGATGGAAGGGTGACAATGAAAACGAGGTTATATCATCTG
CAAGTAGAACAGTACGTGAACCTAGAATCGTAGTTCANACCACAAGTGACATTGATATACTTGATGATGGTTATAGATGGAGAAAATACGGTCAA
AAAGTTGTCAAAGGAAATCCAAACCCAAGGAGTTACTACAAGTGCACATTTACTGGATGTCCGGTTAGGAAGCATGTGGAACGAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377975] SGN-U577212 Tomato 200607 Build 2 46 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190197 [Download][View] Facility Assigned ID: FA0AAD8DD06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0048 Quality Trim Threshold: 14.5