EST details — SGN-C175609

Search information 
Request: 175609Match: SGN-C175609
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C175609Clone name: TUS-21-M15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175609 is on microarray TOM1 spot ID 1-1-2.1.13.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15591 [cLED-13-G13] Trace: SGN-T51622 EST: SGN-E236344 Direction: 5' Facility: TIGR
Clone: SGN-C175609 [TUS-21-M15] Trace: SGN-T190290 EST: SGN-E377099 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E377100Length: 714 bp (921 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377100 [] (trimmed) CTTTCAAAAGATCTAATCACAAATTCCATCTTTCTCATTTAGAAACCAAATCAAACAATTCTCGAATAAATAAGAATTTAGTTGAGAAGAAAAAA
AAAATGGAGCAAAATTTGCCAGTAATAGCAAAGAAATTCTGGAACATAGTGCGAATAGCTTTCTTCATGTTGAGAAAAGGATCTCAAAGAGAAAA
TTCATGCTCGATTTCAACTTACTCATGAAGCGTGGAAAAATCGCTAGTAAAGCCGCATTTCACAATCTCATGTTTCACCACGCGCACCAATTCTC
TTCATCGTCTTCCTCATCAGCTTCTTCTTCAACTCCTGAGTCCGTGTGTGCACGCGCTCCATCCAGCGAGTACGAATTCAGTTGCAGTAACAGCC
CAGCGTACCCAGCTTTTCACCTTCCGTTCCACTTCAACAAGCGCGGCAAGCACCACGCTCATCTCTTTCCGTGTGCACACGCTCCGGCCACCGCG
GACGACGACGTTGTTGTGATGAATGCTGCTATGATGAAGGCTTTGGAAATGATTCAGAGTACTAATGCGTCGCCGGCGAATAATCTGCCTGGATT
CGGAAGGACTCCGACGGTGAGGCAGTTGAGGATTACCGACTCGCCGTTTCCGCTGAAAGATGTTGAAGAAGATAGTCAAGTTGATGAGGCTGCTG
ANGAATTATTTCGAAATTCTATAGGGATTTGATGAGGCAATCTTCACCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377100] SGN-U575299 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190291 [Download][View] Facility Assigned ID: FA0AAD9AG08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0062 Quality Trim Threshold: 14.5