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EST details — SGN-C176023

Search information 
Request: 176023Match: SGN-C176023
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C176023Clone name: TUS-22-N21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176023 is on microarray TOM1 spot ID 1-1-4.2.11.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C18719 [cLED-24-G15] Trace: SGN-T54627 EST: SGN-E240730 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E367979Length: 644 bp (889 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E367979 [] (trimmed) GACTGGGAAATATAATCTTGTTTATTTTTGATATATTAGTAATACTTTTAAGTTTGACAAATATTGCATATCATAGGCACAACAAGGTGATGTCG
GAGGAAGAGATGAAGTTCATGAAGCTCGCTCTATGTAGATAAAGAAGACGAACATTTCCAATAGCATGCTGAATCAATTGAGTTTCTCAAAAACA
ACAAAGTTCGTGGAGACTTGAGGAAGGTTGCCATCACCTCTTCATGTGCTCTATCATTTAAATATCACAAGAGCTTGGATGTGAGTGGACGTTTA
GTATTTCAAAGCTTAGAAAGAAAATAACAAGTCATATTATTTGTTCTTAAATGGAGAGAACATTTAGAGAAGAGGTCGTATTAGTTCTTAAATGG
AGAAACATTTAGACTTACAATAGAGATATGATCTCCACTTGAGTACTTCTCAAAAGTTATACGCATCATCAGCTAAATAGATTTAGTGATGTGTT
TAGATTACTCATTCAAGGTTGTCAGTGTGAGGATAATTGTGTACATGGACATGTTTATAAGCAACTATGTTTATATCAAGTCCATTTGTCATGTA
ATACGCGCTAAGCTTGAAATGTGGAAAGAAGAATTTGAGGCTTTCTATTTTTCACCATCTGCATTTCCTCTCCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E367979] SGN-U566736 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180728 [Download][View] Facility Assigned ID: FA0AAD10CG11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.941 Expected Error Rate: 0.0068 Quality Trim Threshold: 14.5