EST details — SGN-C176107

Search information 
Request: 176107Match: SGN-C176107
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C176107Clone name: TUS-23-B9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176107 is on microarray TOM1 spot ID 1-1-8.2.11.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C20591 [cLED-30-A13] Trace: SGN-T56394 EST: SGN-E242464 Direction: 5' Facility: TIGR
Clone: SGN-C176107 [TUS-23-B9] Trace: SGN-T181261 EST: SGN-E368334 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E368335Length: 607 bp (939 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E368335 [] (trimmed) TTTTCACAAAAGTTGAACATACACAGGACTCAGTAATAACTACTATCGTGAAACTTTGCTTGAAGAGTTTACAAGAATTTGTTCGACTTCAGACT
TTTAACCGTAGTGGATTTCAACAAATTCAGCTGGACATCCATTTTCTTAAAACTACTCTGAAGGACACTGTCGATGATGAAGCTGCTGTTGATTT
TTTGCTTGATGAGGTAATTGTTGCTGCTGCTGAGCGATGTCTTGATCCAATTCCTCTGGAACCTTCTATCCTGGACAGGCTTACCCAAGCAAAGC
TGGCAAAGGCTCGGGAGCAGAGTCCTACCTCATAACACTTATGGTGGCGTTGTGACCATTGAGCTTGCCATGATCTGAAAACGTTCACGAGATGC
TGGCTTACATGCCAAGTACTATATCGGAAATATCAGATCCATGAAAACCTTCTGTAAGGTGTGTATATAACCATTATCCATCTCCGGCTACCATT
TCCTAAACGACTTTCAGTTTCCCTCCGAGTACCTTCAGTTTTCCCAAATCCTGAAGAGGTATTGTTTTGCTGGAAACTAAAGGGGAAACGAATAA
CTCTTGTATTGAAACTAGACAGTTGAGTGTAATGAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368335] SGN-U575451 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181262 [Download][View] Facility Assigned ID: FA0AAD11CA05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.982 Expected Error Rate: 0.0124 Quality Trim Threshold: 14.5