EST details — SGN-C177093

Search information 
Request: 177093Match: SGN-C177093
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C177093Clone name: TUS-25-K11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177093 is on microarray TOM1 spot ID 1-1-6.3.8.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28976 [cLEF-49-M19] Trace: SGN-T62520 EST: SGN-E249012 Direction: 5' Facility: TIGR
Clone: SGN-C177093 [TUS-25-K11] Trace: SGN-T181606 EST: SGN-E369744 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E369745Length: 685 bp (939 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369745 [] (trimmed) GAAGAGCACTACTACACCTTTTCTAATAATCTCCCTTGTTATTCTTCTTGTTGTTTTTCCTATGAGATTTTTGTTCATCATTCTAATTATTGGGG
TATTTTACATGTTGTTTAATACTCTATGGTTAAAGTCATCAGAGAGACTTAGATGGAAACTTAAAAAACAAGGCATATATGGTCCAAAACCATCA
TTTTTATATGGAAATGTTGCTGAAATGCAAAAGATTCAAGCTTCATCTCCCAACAATAATAATGTTTATGCTGAATGTGTAGCACATGATTATAC
TTCTTCACTCTTTCCCTACTTTGAACAATGGCGAAAAATATACGGTCCTGTATTTACATATTCAACTGGAAACAAACTACATTTGTATGTGAACC
AACCAGAGCTAGTGAAGGAAATGAACCAAAGTAATAGCCTGGATTTAGGAAAACCTTCTTATGTCACTAAGAGACTTGCCCCTATGCTTGGAAAT
GGTATTTTGAGGTCTAATGGCCATATTTGGGCCATGCAAAGGAAAATTGTAGCACCTGAATTCTTCATGGACAAGGTCAAGGGCATGGTGAGTTT
GATGTTGCAGTCAGCAGAGTTATTAACCATGAAATGGGATGAAAGGATTGAAGGTGAAGGGGGTAAAATGGCAGAAATTAGTGTGGTAGAGGATC
TGAAAACCTATCAGCAGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369745] SGN-U564048 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181607 [Download][View] Facility Assigned ID: FA0AAD13AF06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.946 Expected Error Rate: 0.0024 Quality Trim Threshold: 14.5