EST details — SGN-C177283

Search information 
Request: 177283Match: SGN-C177283
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C177283Clone name: TUS-26-C9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177283 is on microarray TOM1 spot ID 1-1-8.3.7.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C34463 [cLEG-30-P20] Trace: SGN-T69296 EST: SGN-E255570 Direction: 5' Facility: TIGR
Clone: SGN-C177283 [TUS-26-C9] Trace: SGN-T182189 EST: SGN-E368779 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E368780Length: 658 bp (932 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E368780 [] (trimmed) TTTTGCAAGTGTTGTTAATAATCGGAGCCTTTTAGCGAAATCGCCAGTCTCTCTGTTTAATCTTCTTTTGTTAACAGCTAATAAGTTGTTATTTC
GACTGAATTTTGTTAGCTGGTTTCAGATTTTGAAATGGTGAGGACTGTGAAGAATCATCATGAAGAGGACGAAGAAGACGATGAAGAGTTTTCAT
CTAGAACTCCCGATGGCTCTTCTCAAAAGGGGAAATTAGAAGGGAAGAGCAATGATGGGAAGGTAAGTGCTCATCGTTCGAAGCATTCTGAGACA
GAACAGCGGAGGAGGATCAAGATTAATGAGAGATTTCAGACTCTAAGAGATCTCATACCACAAAATGATCAGAAGAGAGACCGAGCGTCATTCAT
GTTAGAGGTTATACAATATATCCAGTTTTTGCAAGAGAAATTACAGATGTATGAGGGAACCAACCAAGGATGGAGTGCAGAACCCTCGAAGTTGC
TGCCATGGAGAAGTACTCCTGGGCCCGTGGAAGGCTCTGTTGAACATTCTCAAATAATCAGAAACGGCTCTACTCATGAGGATGATATTGTCATT
AACCCAACATTGCCTTGCAAGTGTCCAGAGCTTTGTAGAACCGAACTTGACTGCTGCTGCTTTATATAGAGCAACACACGATTCTAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368780] SGN-U574061 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182190 [Download][View] Facility Assigned ID: FA0AAD14AB05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0028 Quality Trim Threshold: 14.5