EST details — SGN-C177819

Search information 
Request: 177819Match: SGN-C177819
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C177819Clone name: TUS-27-I17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177819 is on microarray TOM1 spot ID 1-1-8.1.6.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C62263 [cLEM-1-P8] Trace: SGN-T83853 EST: SGN-E270480 Direction: 5' Facility: TIGR
Clone: SGN-C177819 [TUS-27-I17] Trace: SGN-T182794 EST: SGN-E371286 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E371287Length: 706 bp (901 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371287 [] (trimmed) GCATATACAAGCCACATTTGCTTGATGGCCGGGCTAGTGCAGGGGCAAGTGTAGATTCTGCAAGACAAAATTTGGCCTCTACATTTGTAAATGCC
TTTGTCAATGCTGGCTTTGGTCAGGATAAGTTGATGACTGTACCCTCAGAGGCGTCAAGTGGTGGTGCCTCAACAAGCTGGCTTTTCAAAAATAA
AGAACATGGAAAAGCTAGCGCTGCAGCTAGTCTGGGTATGATCCTGCTTTGGGATGTTGATTCTGGTCTTGCACAAATTGACAAGTATTTTCATA
GTACTGATACCCACGTCATTGCTGGTGCACTATTGGGAGTTGGGATTGTGAACTGTGGTATCAAGAACGAATGTGACCCTGCATTGGCACTTCTA
GCTGAATATATAGACAAAGAGGACCCTTCAATTAGAATCGGTGCTATAATGGGCCTTGGTCTTGCTTATGCTGGTTCTCAGAATGAGCAGATCCG
TAGTAAATTGACACCAATACTTGGAGATAGCAAGGCGTCCCTTGATGTGCTTGCCTTTACTGCTATATCATTGGGATTGGTATATGTGGGTTCAT
GCAACGAAGAGATTGCTCAGGCAATCATATTTGCATTGATGGAACGAAGTGAGTCAGAATTGGGAGAGCCCTTTGCCCGTCTGTTGCCTCTTGGT
CTTGGTCTCCTGTATCTTGAAAAACAGGAAAGCGTTGAGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371287] SGN-U569045 Tomato 200607 Build 2 60 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182795 [Download][View] Facility Assigned ID: FA0AAD15AE09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0024 Quality Trim Threshold: 14.5