EST details — SGN-C177875
| Search information |
| Request: 177875 | Match: SGN-C177875 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C177875 | Clone name: TUS-27-L1 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C177875 is on microarray TOM1 spot ID 1-1-8.4.6.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C64175 [cLEM-5-F3] | Trace: SGN-T85075 | EST: SGN-E271270 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C177875 [TUS-27-L1] | Trace: SGN-T183167 | EST: SGN-E370930 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E370931 | Length: 538 bp (859 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E370931 [] (trimmed)
GGTCGTTGTCAGAATCGGCTGCCGCGGCTATTCTGATTCAATTGGTTTCTGCGATTAGCTATTGTCATCATATGGGTGTAGCTCATCGTGACATT
AAGCCGGATAATGTGTTGTTTGATTCTGAGAATAGATTGAAGCTTGCTGATTTTGGATCTGCGGAGTGGTTTGCTGGTTGTGATGGGAGGAAGAT
GAATGGGGTTGTGGGTACGCCGTATTACGTTGCGCCGGAGGTTTTAATGGGGAAAGAGTATAATGAGAAAGTTGATGTGTGGAGTTTGGGGGTTA
TTTTGTATATTATGCTTTCTGGGGTTCCTCCTTTTTACGGTGAAACGCCGACTGAAACTTTTCAAGCTGTTCTCAGAGGGAATCTGAGGTTTCCG
ACGAGGAATTTCCGGTCAGTTTCGCCTGAAGCGAAAGATTTGTTGAGGAAGATGATATGTAAAGATGTTTCCAGAAGATTTTAAGCTGAACAAGT
ATTGAGACATCCATGGGTGCTTAATGGAGGAGAAACAAGATCAATGGTTGATTGAACTTGAAC
AAGCCGGATAATGTGTTGTTTGATTCTGAGAATAGATTGAAGCTTGCTGATTTTGGATCTGCGGAGTGGTTTGCTGGTTGTGATGGGAGGAAGAT
GAATGGGGTTGTGGGTACGCCGTATTACGTTGCGCCGGAGGTTTTAATGGGGAAAGAGTATAATGAGAAAGTTGATGTGTGGAGTTTGGGGGTTA
TTTTGTATATTATGCTTTCTGGGGTTCCTCCTTTTTACGGTGAAACGCCGACTGAAACTTTTCAAGCTGTTCTCAGAGGGAATCTGAGGTTTCCG
ACGAGGAATTTCCGGTCAGTTTCGCCTGAAGCGAAAGATTTGTTGAGGAAGATGATATGTAAAGATGTTTCCAGAAGATTTTAAGCTGAACAAGT
ATTGAGACATCCATGGGTGCTTAATGGAGGAGAAACAAGATCAATGGTTGATTGAACTTGAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E370931] | SGN-U564186 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T183168 [Download][View] | Facility Assigned ID: FA0AAD15CF01RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.958 | Expected Error Rate: 0.0079 | Quality Trim Threshold: 14.5 |
Working
