EST details — SGN-C177915

Search information 
Request: 177915Match: SGN-C177915
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C177915Clone name: TUS-27-M17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177915 is on microarray TOM1 spot ID 1-1-8.1.6.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64244 [cLEM-5-I9] Trace: SGN-T85165 EST: SGN-E271360 Direction: 5' Facility: TIGR
Clone: SGN-C177915 [TUS-27-M17] Trace: SGN-T182816 EST: SGN-E371308 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371309Length: 746 bp (911 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371309 [] (trimmed) GATGAATTCGACAAAACTTTCTCCATGAACCAGGCGAGATCTATCAGGTGGAATGTAACTGCCAGCGGAGCTCGTCCTAATCCTCAAGGTTCTTT
CAGATATGGCTCAATTAATGTGACAGAGATATACGTGGTCCAAAATACGCCACCAAAGGTGGTAGATGGAAAAAGGAGAACAACACTTAATGGGA
TTTCATTTGTTAATCCTAAAACACCAATCAGACTTGCTGACCAGTACAAATTAAAGGGTGTATATAAGCTAGATTTCCCTACGGCACCACTAACC
GGACCTCCTAAGATGGAAACCTCTATTATCAATGGTACCTACAGGGGATTTATGGAAGTAATATTTCAAAACAATGATACTAAAATGCACACATA
CCATATGAGCGGATATGCCTTTTTTGTGGTCGGGATGGATTTTGGCGTGTGGTCAAATAATAGTAGGGGTACTTACAACAAATGGGATGGAATAG
CTCGTACCACAACACAGGTTTTCCCCGGGGCATGGACAGCAATCTTGGTCTCCCTTGACAATGTTGGAGTTTGGAACCTGAGGACAGAAAACCTC
GACTCGTGGTTTCTAGGACAAGAAACCTACATCAGGGTTGTTAACTCCGAGCCTACTAACAAGACAGAGTTGCCAATGGCCAGACATGCTCTCTT
CTGTGGTCAACTCNGCAAACTACAAAAGCCACAAGATATATCATATGCAACATCCAACGAGTCGAAATTCTCCTTCATGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371309] SGN-U579163 Tomato 200607 Build 2 40 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182817 [Download][View] Facility Assigned ID: FA0AAD15AG09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.982 Expected Error Rate: 0.0088 Quality Trim Threshold: 14.5