EST details — SGN-C177931

Search information 
Request: 177931Match: SGN-C177931
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C177931Clone name: TUS-27-N9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177931 is on microarray TOM1 spot ID 1-1-8.2.6.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64269 [cLEM-5-K15] Trace: SGN-T84998 EST: SGN-E271193 Direction: 5' Facility: TIGR
Clone: SGN-C177931 [TUS-27-N9] Trace: SGN-T183107 EST: SGN-E370870 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E370871Length: 600 bp (894 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370871 [] (trimmed) GCCGTTTTTAACTGCGAGTGCATCTGGGCCGACGTTTTCCGGTGGGTCGGAGAACGATGCTGCTTCAACTGGAGCTTCCGGTTCGATGAAACGGC
GGAGTGGTGGTGGTGGTGGAGTTAGCAAAAAAATCGTGAAGCGTAAGCCACGCGCTTCGAAGCGCGCGTCGACTACATACATAACGGCGGACGTT
GATAGTTTCCGGCAGATGGTGCAGCAGGTGACCGGAGCTAGAATCTCCGGTAACGGGACCGGGAACGGACAGTTTTCGGTTTCTTCTATTTTGAA
GCCGGAGCCGAGGAGACAGGTTGACCGGGTACAGCCGGTGAGCTGTTTGCCTACTTTGGACACGTCAGCTTTTCTACTGGACCCCACTTCATCGT
TCATGCACCCACCACCGGCGGTGGCCGGGAGGGTCGCCGCCGTACATCAGCCGTCTGCGGTGGTGGTTGACGGTGGCTATGGTTTTGACTCTTTT
TGTGACTTTCCTACCCTTGAATCAGGAATGTAATGCTAATGAAGTTAGTAGTATTATTAGGGACTTTGTTGTAATTTCACCTTTATAGTTTAGGG
GAAGGGTAAATGGGGAAATCAGATCTGTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370871] SGN-U584654 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183108 [Download][View] Facility Assigned ID: FA0AAD15CG05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0171 Quality Trim Threshold: 12.5