EST details — SGN-C178018

Search information 
Request: 178018Match: SGN-C178018
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C178018Clone name: TUS-28-A24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178018 is on microarray TOM1 spot ID 1-1-1.1.4.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64422 [cLEM-6-B23] Trace: SGN-T84627 EST: SGN-E270871 Direction: 5' Facility: TIGR
Clone: SGN-C178018 [TUS-28-A24] Trace: SGN-T183343 EST: SGN-E370153 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E370154Length: 687 bp (834 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370154 [] (trimmed) AAAATCTCCATTTTAAGTCACTTCTTCAATTTGAAGAAATTCTCATGTACAACGTCAACAACAATATGGTCATCAATGTTGCCTCAATGGAGATA
TTGTAACAAGAATTTGCATTATTGGATATTACCACCTTCAAAAACTAAACTTAGCTTCTTTTATTTACCTATTTTATCTTCTTTCACTAATAATA
ATGATTCTGTATCACCCATCAAACAAAATCAGGCTATGTATGACCCTTCAGAGGAGCTTTTTGGACTTGATGCTGATTTGCAGCCAAGGAAGGTC
ATTTCTAGTTCATCGAGTCCGAGATCATGGTTTGGCCCAAATGGACAGTATATAAGAGAACTGCCTTGTCCAAGCTGCAGAGGAAGAGGCTACAC
TTCATGTACTGAATGTGGAATCGAGAGATCCAACTTAGATTGTTCGTTGTGTAATGGAAAGGGTATGATAACTTGTCATCAGTGTGGTGGAGATT
GTGTCATTTGGGAAGAGTCTATCGATGAACGGCCTTGGGAGAAAGCTCGATCAAGTTCACCTTTAAAAGTAAAAGAAGACGATGAAGTGGACGAC
TTAGACATAAAGCTTGACGCGAAGAGAAAAACCAAGCGTGTCTACCAATCTCCCACACAGAAGTCAATTTGAAGATCAGCAGATCACTAAAATTG
GATGATTGCAGAGCCTAAATGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370154] SGN-U567697 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183344 [Download][View] Facility Assigned ID: FA0AAD16BA12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5