EST details — SGN-C178127

Search information 
Request: 178127Match: SGN-C178127
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C178127Clone name: TUS-28-F13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178127 is on microarray TOM1 spot ID 1-1-4.2.4.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64591 [cLEM-6-J17] Trace: SGN-T84476 EST: SGN-E270720 Direction: 5' Facility: TIGR
Clone: SGN-C178127 [TUS-28-F13] Trace: SGN-T183553 EST: SGN-E371193 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E371194Length: 698 bp (893 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371194 [] (trimmed) GCACCAAAATTGTTCAGTGCATAGGTACTATTTTGCACCTACCCTCGAGCATAAGAAATTTTTTTTTATTTTCATTTTCTCAAGAACTGCAGATG
CTAAATTTGGCCTGTTTGAACATCTTTTTAACAATCTTTCCTTAGGTTATACTTATTTCTCTTCAACGGATTAGTAGTTTTTTCTTCTATATGCT
AGAAATGGATTAAGTTTGCTGAAACTGGTGCCGGATAAGATGGATACACATATTATTCATCACTCAACCCATTATTTATCCATAAAAATATATGA
TAAATAGCCTAATTTCGAGAGTCTTCACGGTGAAGTAGCTCGCCAGCCCCGTTGAAGGCAAACAACAACATTATATGGCTATTCCTCTATTTAGA
AGTTTTCGAAGACTTCTGTTACTTTCACATCGCAGGCCTCTATCCTCTTCCTCTACCTCGTACACGCCAATTCTTGGAAACCGAGAAAGCTTTTT
GCACTTGTCAAGGTTTGTGCCTCAAAATAGCTTAACCCGACAAGGCTCATGTTGGGACTTGAGGAACTTTAGTCATGGAAGTGTGAATTTTGTTA
TAACAAAAGATGGGAAACCCAAGTTTGAGACACATGAAGTGGAAGCACCAAAGAAAGAAAAATGGAAGACAAAGAAGAGGCTGAAGCTGCAAAGG
AAGAGAGAGAAGAAAAAGAGAAATGCTGCAAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371194] SGN-U577306 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183554 [Download][View] Facility Assigned ID: FA0AAD16CC07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0028 Quality Trim Threshold: 14.5