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EST details — SGN-C178218

Search information 
Request: 178218Match: SGN-C178218
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C178218Clone name: TUS-28-J8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178218 is on microarray TOM1 spot ID 1-1-1.2.4.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C65017 [cLEM-8-B14] Trace: SGN-T85606 EST: SGN-E272055 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370786Length: 373 bp (918 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E370786 [] (trimmed) GCCCAAGGCAACGATCTTGTTCACCGGCGCCGGCGGGGTACGAACTCATCTGAATCTGAGACATCTTTGGTGCGTTCAAGATTTCGAGAATTTGC
GTTGTATTGTACAAGTTTGGTTATGAAATTAAGGTAGGCGGTGAAAATGGAGAGAGTGTTCAGTAAGCTTCGGAATTTGGACGCTTACCCTAAAA
TCAATGAGGATTTCTATAACCGCACGCTTTCCGGTGGTATTATTACCCTCGTCGCCTCCGTTATTATGCTCGTTCTCTTCGTCAACGAGCTTGGA
TTATATATTCACAGTTATACTGAAACACAGCTCGTAGTAGATACTTCAAGGGGAGGAAAATTACATATACATCTGTTCCATGTTCACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370786] SGN-U576489 Tomato 200607 Build 2 30 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183718 [Download][View] Facility Assigned ID: FA0AAD16DE04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.982 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5