EST details — SGN-C178267

Search information 
Request: 178267Match: SGN-C178267
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C178267Clone name: TUS-28-L9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178267 is on microarray TOM1 spot ID 1-1-8.4.4.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C65087 [cLEM-8-E3] Trace: SGN-T85312 EST: SGN-E271761 Direction: 5' Facility: TIGR
Clone: SGN-C178267 [TUS-28-L9] Trace: SGN-T183507 EST: SGN-E371147 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371148Length: 716 bp (911 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371148 [] (trimmed) GAAGGTGTTCGCTGTCAGAAACTAAATACAGATTGTTCATTGGTAATGTACCAAAGAGCTGGTCTGATGATGACTTCAGAAAAGTCATTGATGGG
ACTGGTCCTGGTGCAGAATTAATAGAACTCATAAAGGATCCTCAAAACCCAGCACGTAATAGGGGTTTTGCTTTTGTTGAATATTACAATAATGC
CTGTGCGGATTACTCTCGGAGAAAAATGGTAAGTACAAACTTTAAGCTGGAGGGAAATTCACCAACTGTCACCTGGGCTGATCCGAAGATTACAC
CTGATCATTCTTCTGCCGCTGCTCAGGTCAAAGCACTCTATGTGAAGAACATTCCAGAAAACACTCCTACTGAACAATTGAAGGAATTGTTCCAA
CGCCATGGTGAAGTTACCAGAGTTGTTATGCCACCAGCCAAGGTTGGTGGTAAACGAGACTTTGGATTTGTCCATTATGCAGAAAGGTCAAGCGC
TCTGAAAGCTGTCAAAGACACTGAAACATATGAAGTAAATGGTCAGATGTTAGAAGTAGTTCTTGCAAAGCCTCAGACTGAAAAGAAGTTTGATG
CAGCTAGTCCTCACAATGCGATGCCACATCATAATTATATTCCCCATCCAGGCTATGGTGCATTTCCGATGAACCCGTATGCACCTCTAACTGCT
GGTTATGGTGCTGCTGCTGCTGCTGCTGCCGCTGCGTTCCAACAACCTATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371148] SGN-U581107 Tomato 200607 Build 2 41 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183508 [Download][View] Facility Assigned ID: FA0AAD16CF05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5