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EST details — SGN-C178315

Search information 
Request: 178315Match: SGN-C178315
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C178315Clone name: TUS-28-N9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178315 is on microarray TOM1 spot ID 1-1-8.2.4.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C65174 [cLEM-8-I23] Trace: SGN-T85330 EST: SGN-E271779 Direction: 5' Facility: TIGR
Clone: SGN-C178315 [TUS-28-N9] Trace: SGN-T183591 EST: SGN-E371231 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371232Length: 626 bp (904 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371232 [] (trimmed) GGAGAAATCTCAGTAGAATCTACACAAGCAGATCCAATTCTCTTCTCCATTTCTGCCTCCTTTCTTCCTAGCCCTAGTTCTCTCCCTATTTGGGA
ATTTCATTTCTTCGCTTTGAAATGGCCACTGAAGAACCAGTCATCGTTAACGAGGTTGTTGAAGAGCAAGCCGCTCCTGAAACTGTCAAGGATGA
GGCAAACCCTCCGGCCAAGTCTGGAAAAGCAAAAAAAGAGACCAAGGCGAAGAAGCCTGCTGCACCAAGGAAGAGAAGCGCTACTCCGACTCATC
CTCCTTACTTTGAGATGATTAAGGATGCGATTGTGACATTGAAAGAGAGAACTGGATCCAGCCAGCACGCTATTACCAAGTTCATTGAGGAAAAG
CAGAAGAGTCTACCATCTAATTTCAAAAAATTGTTGCTTACCCAGTTGAAGAAGTTTGTTGCTTCTGAGAAGCTGGTGAAAGTTAAGAACTCTTA
CAAGCTTCCATCAGGTTCTAAGCCTGCTGCTGCTGCTGTCCCGGCGAAGAAGAAGCCTGCTGCAGCAAAGTCAAAGCCTGCTGCGAAACCAAAAG
CCGCCGTCAAGCCCAAGGCAGAGCCCGCTGCCAAGGCAAAACCCGCTGCCAAGGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371232] SGN-U579497 Tomato 200607 Build 2 84 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183592 [Download][View] Facility Assigned ID: FA0AAD16CG05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0080 Quality Trim Threshold: 14.5