EST details — SGN-C179100

Search information 
Request: 179100Match: SGN-C179100
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C179100Clone name: TUS-30-O2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179100 is on microarray TOM1 spot ID 1-1-7.3.3.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78806 [cLES-6-N10] Trace: SGN-T98673 EST: SGN-E287221 Direction: 5' Facility: TIGR
Clone: SGN-C179100 [TUS-30-O2] Trace: SGN-T184629 EST: SGN-E372015 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372016Length: 544 bp (889 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372016 [] (trimmed) GGTGCAACAGCTCCTCAAAGACTATTTTGACGGGAAGGAGCCCATCAAGGGTGTAAATCCTGATGAAGCAGTTGCTTATGGTGCTGCTGTTCAAG
GTGGTATCCTCAGTGGTGAGGGTGGAGATGAAACTAAAGATATCCTTCTCCTGGATGTCGCTCCTCTCACCCTTGGTATTGAAACCGTTGGTGGT
GTGATGACCAAATTGATCCCCAGAAATACCGTTATCCCAACCAATAATTTCCAGGTCTTCACCACTTACCAAGACCAGCAGACCACTGTCTCCAT
TCAGGTTTTTGAAGGTGAAAGGAGTCTTACCAAGGACTGTAGGAATCTCGGGAAGTTTGATCTTACAGGATTTCCTCCAGCTCCAAGGGGAACCC
CCCAAATTGAGGTCACATTCGAAGTTGATGCCAATGGTATCTTGAATGTCAAAGCAGAAGACAAGGGTACTGGAAAAGCAGAGAAGATTACCATT
ACAAACTACTAGGGCCGTTTAAGCCAAGAAGAGATTGAGCGTATGGTTCGTGAAGCATAAGAGTTTGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372016] SGN-U570961 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184630 [Download][View] Facility Assigned ID: FA0AAD18BH01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0138 Quality Trim Threshold: 14.5