EST details — SGN-C179211

Search information 
Request: 179211Match: SGN-C179211
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C179211Clone name: TUS-31-C17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179211 is on microarray TOM1 spot ID 1-1-8.3.2.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76697 [cLES-18-N19] Trace: SGN-T101753 EST: SGN-E289311 Direction: 5' Facility: TIGR
Clone: SGN-C179211 [TUS-31-C17] Trace: SGN-T185101 EST: SGN-E372644 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E372645Length: 726 bp (891 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372645 [] (trimmed) TTTATGGGGACAAGCTGGATATAGCAGAGTCAAATGGCCTAGGAGAAACTGCTGAATTTGACATAAAACTTGGACAATCTCTCCCTCCTCCTCTA
TTTCCATATCTAAGGCTTGTTTCCCTTGGTGGAACTGATAATTTCCTACTAGAATCAATTACTGGAAATGCTGTTTGGAATCTTCTCGAGTTGCC
TGTCAGCAGAGCAAACGAAGAGCTCATATGTAAAGTTGTACGAGATTTATGCAGATCTGCACTTTCTGGATATCACACCACAATTGAAGAGGATG
AGAAACTGATGAAGGGAGGGAACCTCAGTTCAAGGCTTCAGATAGCAGTAGGGGTGAGAGCAGGGGAGAAGAAGGTTTTACAACAAGTCGACGAT
ATCTTTAGAGAAAGAGAACTGGAACTAGATGAATTAGAGTACTACCAAGAAAAGGAGGCTTAAAGATCTTGATCTTGTTGGATAGCCAAAGTAAG
GAACTCTCTGCAGACCTTATTATCATTCTAGTTGAGTTATAACAGCTTGGACTTCAAAGTCAGAGGCGGATCTAGAATTTATAGGCTCATATACG
AACCTCAACTTAGCTATACGACTTCTCAGCACACATTTTGGATTTTCTTCAAGTACCCTTTATTGAGCATGACATTTAGATAAACGATCAAACTG
TTACATTTCTTTGCTCTACATTTTAGAGCATTTGATAGTAAAAAAAGGTTATATTCCCTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372645] SGN-U566499 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185102 [Download][View] Facility Assigned ID: FA0AAD19AB09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0052 Quality Trim Threshold: 12.5