EST details — SGN-C179292

Search information 
Request: 179292Match: SGN-C179292
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C179292Clone name: TUS-31-G2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179292 is on microarray TOM1 spot ID 1-1-7.3.2.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77268 [cLES-20-H11] Trace: SGN-T102091 EST: SGN-E290412 Direction: 5' Facility: TIGR
Clone: SGN-C179292 [TUS-31-G2] Trace: SGN-T185203 EST: SGN-E373761 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E373762Length: 590 bp (892 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E373762 [] (trimmed) AAATTGGAGCAGAAGAAGATGGAGGCGGCGGCAGCAACAGCGGAATCTGTTCAATGCTTCGGGAGGAAGAAGACAGCTGTAGCAGTAACCCACTG
CAAACGCGGTAAAGGTTTGATCAAGATCAACGGTGTACCTATCGAGCTAGTTCAGCCAGAGATTCTGAGGTACAAGGCTTATGAACCTATTTTGC
TTTTAGGACGACATCGTTTTGCTGGTGTAGACATGAGGATCCGTGTGAAAGGTGGAGGTCACACGTCACAAATCTATGCAATTCGTCAGTCAATA
GCGAAAGCACTTGTTGCATTTTACCAGAAGTATGTTGATGAGCAGTCGAAGAAGGAGATTAAGGATATACTTGTGCGATATGATAGGACTTTGCT
TGTTGCTGATCCTAGACGATGTGAGCCTAAGAAGTTTGGTGGTCGTGGTGCCCGTTCTAGGTTCCAGAAATCTTACCGTTAATTTCTTTTTATTT
CTGTCTCGTTATGGTTTTTGAACTTGTGCGCTGAGAATTTTGAAGTGATATTTCTAATGTTTTGGATTTTAAACTTTTATTATATGACTGCAATG
TGATCAATCGATTCTATTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373762] SGN-U578137 Tomato 200607 Build 2 36 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185204 [Download][View] Facility Assigned ID: FA0AAD19BD01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0014 Quality Trim Threshold: 12.5