EST details — SGN-C179510

Search information 
Request: 179510Match: SGN-C179510
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C179510Clone name: TUS-31-P4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179510 is on microarray TOM1 spot ID 1-1-5.4.2.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82336 [cLET-1-K12] Trace: SGN-T102443 EST: SGN-E292169 Direction: 5' Facility: TIGR
Clone: SGN-C179510 [TUS-31-P4] Trace: SGN-T185694 EST: SGN-E373556 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E373557Length: 727 bp (881 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E373557 [] (trimmed) TTGATTTCCTAGTCTTGTTATGTGCTTTCTTCGGTGTCATATTCGTTTCTGTTCAAGATGGTCTTGCTATTGCAATTGGCATATCAATGTTAAAG
GTGTTAATGCAAATTACAAGGCCAAAAACAGTTATGTTAGGGAACATACCTGGTACTGGTATTTATAGAAATGTTGATCACTATGAAGAAGCTTT
GAGTGTTGCTGGTTTTCTCATTTTAAGTATTGAAGCTCCAATCAACTTTGCTAATGTTACTTATCTTAAAGAAAGGATTTCGAGATGGATACAAG
ACTACGAGGAGGAAGGAGCCAAGAAACAACCGGGGCTTAGAGTTGTAGTCCTCGATTTGTCTCCTGTGAGTTCTATTGATACAAGTGGAATCTCA
TTGTTCAAGGATTTAAGTATGGCATTGGAAAAGAAAGGACTTGAGTTTGTGTTGGTGAATCCAATAGGTGAAGTAATGGAAAAACTACAAAGGGC
TGATGAAACCAAAGATTTGATGAGACCAGATGTTCTTTTCTTAACAGTTGAAGAAGCTGTAGCTTCACTTTCTTCAACTGTTAAGTATCAAATAC
CAGAACATGTTTGATATTTTTTTTCTTCTGTTGTTTAAGCTTTTGTAATTCTATTTGGTTCTATCAATCACCTTTTAGATTTACTATAATACTTT
TGAATTGTAAAACCCAAAACATTACCTAAGAAAGCATAATTCATATCAATCCAAATATTTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373557] SGN-U582421 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185695 [Download][View] Facility Assigned ID: FA0AAD19DH02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.948 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5